Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2352 ATGGCCGGAACAAAGGCAACAAGAAGTAGCTCCAGTACCATTGTGGTGGCTGCATTCATGACGGCTCTCATCGCCGGCACCGCCACCAAAGTCCTGTCAGACGACACGTCCCCGGTTCCCGGTGACAAGTCCCAACTTACGAAATGGTTCAACGACAACGTGAATCCATTGTCGTCGCATCTTCGAATGAATAATAATAAGAAGGGCGTAACAGTTAACCCTAATCTTGTAGCTGCAGAGAAACAAGTGAAAGTGATAAAGGTGATGAAAGATGGAAGCGGAGACTTCAAGACGGTGACGGACGCCATTAAAAGCATCCCTGAAGGTAATCAGAGGAGAGTGATAGTGTATATTGGAAGTGGGACTTATTTTGAGAAGATAAAGATAGAGAAGACGAAGCCATTTGTGACTCTGTTTGGTGATCCTAAGAATTTCCCAAACTTGACCTTTGATGGAACTGCACAAAAATATGGAACTGTGGATAGCGCTTCGTTGATTGTTGAATCAGATTACTTCGTTGCTGTCAATCTCATTATTTCGAATAAGGCACCAATGCCGGATGGGAAGATGGCGGGGGCTCAGGCGGTGGCGTTGAGGATTTCCGGCAACTACGCGGCATTCCACCATTGCACATTGTTGGGATTTCAGGACACCGTTTGTGACGATAGGGGGAAACATTTCTTCAAAGATTGCTACATTCAGGGCACCATGGATTTCATCTTTGGAAGTGGAAAATCTCTCTATCTGAACACAAAGTTGGTAGTTGTTGGGAAAACGGGAGGGGTGATAGCAGCGCCAGCAAGGACGAACCAATCGGATGACACGTGTGGATATTCGTTTGTGCATTGTGAGATAAGTGGGACAGGGAATGGGACGCACCTGGCGAGAGCATGGATGTCACATCCCAAAGTGGTATACGCTTACACCTCCATGAGCTCTATTATTAACCCCCTCGGTTGGCAAGATGGCCCTCAAGGCTCTCCCAATACGGTATATTACGGGGAGTACAAGAACAAAGGAGTAGGTGCAAATAAGAGAGGAAGGGCCAATTTCACAAAGTGGCTTAGTGACTTAGAGGCTTTACCTTTCATCACTCTTGGCTACATTGAAGCCTCCAAGTGGTTGCTTCCTCCCCCAAAACTCCACTAG 1149 0.4708 MAGTKATRSSSSTIVVAAFMTALIAGTATKVLSDDTSPVPGDKSQLTKWFNDNVNPLSSHLRMNNNKKGVTVNPNLVAAEKQVKVIKVMKDGSGDFKTVTDAIKSIPEGNQRRVIVYIGSGTYFEKIKIEKTKPFVTLFGDPKNFPNLTFDGTAQKYGTVDSASLIVESDYFVAVNLIISNKAPMPDGKMAGAQAVALRISGNYAAFHHCTLLGFQDTVCDDRGKHFFKDCYIQGTMDFIFGSGKSLYLNTKLVVVGKTGGVIAAPARTNQSDDTCGYSFVHCEISGTGNGTHLARAWMSHPKVVYAYTSMSSIINPLGWQDGPQGSPNTVYYGEYKNKGVGANKRGRANFTKWLSDLEALPFITLGYIEASKWLLPPPKLH 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2352 382 FunFam Pectinesterase 81 377 - -
Lele05g2352 382 Pfam Pectinesterase 86 368 IPR000070 GO:0030599|GO:0042545
Lele05g2352 382 Gene3D - 80 377 IPR012334 -
Lele05g2352 382 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 79 375 - -
Lele05g2352 382 SUPERFAMILY Pectin lyase-like 85 375 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2352 Lele-ChrLele05 39102002 39107563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2352 16 381 Carbohydrate Esterase AT1G69940 54.496 9.25e-144 410