Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2338 ATGTTGGATCTCAATGTCGATATGGAAGGTTCTCAGCTCCAAAGGGAAGAAGACTCTGTTACTTCCAACTCCTCTGTGCTGAATTTTGAAGAATCTCGAGACGAAGATTCTTCTGCCTTCGTGTTCGACATACTGAAGAGAGAAACAAATTGTCGGGTTGAGGATGAAGAGAGGGAGACGCCAGAAGAAATCACGACAAAGCCACTTTTCCCTGTGAATAGTGACGAGAAGGGACGCAGAGATTGTGATTTGCGATTGGGATTCTCATGTTGGAGAAGTAATCAATGGCTGAACCTTTCCTTCGCTGAGAGTGGTGCTGCTGGCACGCAAGGTGAATTGAGAGTGTTACAGCAAAAGCAACCCCAAATCAGGAAAAGCAGAAGAGGGCCCAGGTCTCGAAGTTCACAGTACAGGGGTGTTACTTTCTATCGGAGAACTGGTAGATGGGAGTCCCATATATGGGATTGTGGGAAGCAGGTCTATTTAGGTGGATTTGACACTGCACATACTGCAGCAAGAGCGTATGATAGGGCTGCAATTAAGTTCAGAGGAGTTGATGCTGATATAAACTTCAGTCTGAGTGATTATGAGGAAGACATGAAGATGATGAAAGGTTTGAGTAAAAATGAGTTTGTCCAAGTCCTTCGCCGACAATGCTCTGCTATCCCAAGAGGGAGCTCCAAATATAGAGGTCTTTCTCTCAACAAATGGGGTCAATGGGAAGCACAAGCCAGCCCTTTCCTTGGCAAAAAGCTTTATGACAAGCTACCCATCAAGAGTGATGGAATAGGATTGGTGACTGGCTTTGAGCCTAGCAAGGGAGAGAGAACTCTTGAGTCCAGCAGAGGAGGGAATCATCAAAATCTGGATTTGAGCCTTGGAATTTCTCCACCTCGTAATGAATCCAAGAAGAATGATGCTGCCAGAGGCTTTTCTTTTCGTTATACAGCTTGTGAGAAACCTAACAAAGGAGGGCCAATGGCTGATGGCAATGGCGCTGCATTGATAAGGGGACAAGCCATTTATGGTGTGGCAATGCCATCTAAATATGACCAAATATGCTCTGGCTTATATCCCGTGCATAAATGCCAGGAGAAGGCCATAGAAAAGAGAAGTGTTGTTCCTTTATCAAGATTCCCAAATTTGGCTTGGCAACTTCACAGCAACGGTAGCATCGCGCCGGTGCCAGTGTTTTCTAATGCAGCATCATCAAAATTCATTTCTTCTAGCAACAATGGTGGACCAGCAGCCCCACATGAAATAATCAACCCTCATAATAACAATTCCATCTACAATTTGTGCTTCAGTTCAACCCCAACATCACACTTAATAACTCCCCAAGTTGCCAAAGTCTTAGTAGCTGAAATTGAAGATCCATGA 1380 0.4464 MLDLNVDMEGSQLQREEDSVTSNSSVLNFEESRDEDSSAFVFDILKRETNCRVEDEERETPEEITTKPLFPVNSDEKGRRDCDLRLGFSCWRSNQWLNLSFAESGAAGTQGELRVLQQKQPQIRKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHTAARAYDRAAIKFRGVDADINFSLSDYEEDMKMMKGLSKNEFVQVLRRQCSAIPRGSSKYRGLSLNKWGQWEAQASPFLGKKLYDKLPIKSDGIGLVTGFEPSKGERTLESSRGGNHQNLDLSLGISPPRNESKKNDAARGFSFRYTACEKPNKGGPMADGNGAALIRGQAIYGVAMPSKYDQICSGLYPVHKCQEKAIEKRSVVPLSRFPNLAWQLHSNGSIAPVPVFSNAASSKFISSSNNGGPAAPHEIINPHNNNSIYNLCFSSTPTSHLITPQVAKVLVAEIEDP 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2338 459 MobiDBLite consensus disorder prediction 117 136 - -
Lele05g2338 459 Gene3D AP2/ERF domain 135 194 IPR036955 GO:0003700|GO:0006355
Lele05g2338 459 MobiDBLite consensus disorder prediction 1 35 - -
Lele05g2338 459 SMART rav1_2 136 198 IPR001471 GO:0003700|GO:0006355
Lele05g2338 459 MobiDBLite consensus disorder prediction 281 299 - -
Lele05g2338 459 FunFam AP2-like ethylene-responsive transcription factor 135 194 - -
Lele05g2338 459 ProSiteProfiles AP2/ERF domain profile. 136 192 IPR001471 GO:0003700|GO:0006355
Lele05g2338 459 MobiDBLite consensus disorder prediction 274 306 - -
Lele05g2338 459 SUPERFAMILY DNA-binding domain 135 193 IPR016177 GO:0003677
Lele05g2338 459 CDD AP2 136 191 IPR001471 GO:0003700|GO:0006355
Lele05g2338 459 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
Lele05g2338 459 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 107 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2338 Lele-ChrLele05 38938181 38941578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2338 1 406 AP2-EREBP Transcription Factor Family AT5G60120 40.625 1.53e-66 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g2338 AP2 6.6e-10 CL0081