LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele05g2330	ATGCAGGGAAAATTTTTCACAGACCCAGAAAGTAATAATCATGCTTTGCTCAAAACTACTGCGATTTCTGCTTCTTGCTTGCATGCTTCTCCTTCTCCTTCTCCGCCATTACAGCGCTTAGTATTTCACCAGTTACTAAGTAACCTCACACTTAGGTGGAACGGTAGTGTACCGTACTGCGATCGAGGTCTCAATTCATCTGAATTTTTCAATTTAACGTCACCGGTTTTGGGATTGCAATCTATATGGATTTTGAGACTTTCCGATCCGAAAATGGTAACTCCTTTGGATATTGCTTATAGCAGTGATTATGCTGAAGCGAATAGCCCTCTGAGAATTCTGGAGTTAGAAAGTGATGGGAACTTGAGAATTTACAGTTCCTCTGGAGGTAGTGGAATTTCTGCTGTAAGAAGGGTAGCTATTGAAGATCAATGTAAGGTTTTTGGGTATTGTGGGAACTCTGGGGTATGTAGTTACAAGGATTTAAACCCAATTTGTGAATGCCCATCTGAGAATTTTGAGAGGATTGATCCAAATGATAGTAGAAAAGGTTGTAGGAGAAAGGTAAGGCTTGAGGATTGTCCAGGTAGGGCTGCTATGTTACAATTTGATCATGCTCTAGTTTTGACTTATCCTCCTATATTCATGGTTAATCCAGAGGTATTTTTCGTCGGTATATCGGCTTGCAGAGGAAATTGCCTTGCAGCTGGTTCTTGTTTTGCTTCTACTTCATTATCAGATGGCACAGGTCTGTGTTACATAAAGACATCTAGTTTCATAAGTACCTACCACAATCCATCACTACCTAGCACTTCATATGTTAAAGTTTGTGGACCGGTGGCACCAAACCTGCCACCGAGTTTGGAGGAAGCCGGGAAGGTTCTCATACAAGGAGCTTCAGCGATCGACAAAAGGGGTTCAAAGAGAAGCTTGGTGATGGTCGATTTGGCGCTGTTTACAGAGGAATTCGCGAACAGAACAGTTGTTGCAGTTAAACAACTCGAGGGCATTGAGCAAGGTGAGAAACAGTTCAGAATGGAGGTTGCTACTATAAGCAGCACTCATCATCTGAACTTGGTGAGGCTAATTGGGTTTTATTCTGAAGGAAAACATAGGCTTTTGATAGTGAGTGGAAGAAGGAATTTCGAAGTGTCAGAAGGAACAAAGTGGACAAAGTTCTCCATGTGGGCTTATGAAGAGTTCCTGAAGGGTAACATGAAGGGAGTTGTTGACAAAAGATTAGCTAATAACCATGAAGTTGATATGGAGGAAGTGAAAAGGGCTATAATGGCGAGTTTCTGGTGCATTCAAGAGCAGCCATCTCAGAGGCCAAAAATGAGCAAAGTGGTGCAGATGCTAGAAGGAATCACTGAGATTGAGAGATGCCACCAGCCCCAAAATCTGTGA	1407	0.4229	MQGKFFTDPESNNHALLKTTAISASCLHASPSPSPPLQRLVFHQLLSNLTLRWNGSVPYCDRGLNSSEFFNLTSPVLGLQSIWILRLSDPKMVTPLDIAYSSDYAEANSPLRILELESDGNLRIYSSSGGSGISAVRRVAIEDQCKVFGYCGNSGVCSYKDLNPICECPSENFERIDPNDSRKGCRRKVRLEDCPGRAAMLQFDHALVLTYPPIFMVNPEVFFVGISACRGNCLAAGSCFASTSLSDGTGLCYIKTSSFISTYHNPSLPSTSYVKVCGPVAPNLPPSLEEAGKVLIQGASAIDKRGSKRSLVMVDLALFTEEFANRTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFYSEGKHRLLIVSGRRNFEVSEGTKWTKFSMWAYEEFLKGNMKGVVDKRLANNHEVDMEEVKRAIMASFWCIQEQPSQRPKMSKVVQMLEGITEIERCHQPQNL	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele05g2330	468	PANTHER	OS07G0415500 PROTEIN	375	465	-	-
	Lele05g2330	468	SUPERFAMILY	Protein kinase-like (PK-like)	325	375	IPR011009	-
	Lele05g2330	468	Gene3D	Phosphorylase Kinase; domain 1	317	377	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele05g2330	Lele-ChrLele05	38851980	38854368	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele05g2330	366	467	Receptor kinase-like Gene Family	AT5G38280	33.019	1.17e-08	55.5

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Lele05g2330		None	None	None