Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2309 ATGCGTGAAACGCACCAGACAAATGGGAAAACCTTCAAGAAACCCCGCCATCCATATGAGAAGGAGCGTTTGGATGCTGAGTTGAAGCTTGTGGGAGAGTATGGACTTCGCTGCAAAAGGGAGCTTTGGAGGGTTCAGTACGCTCTGAGTCGTATCTGTAATAATGCAAGGGAACTTTTGACCCTTGATGAGAAGAACCCACGTCGGATCTTTGAGGGTGAAGCTCTTCTGCATCGTATGTTTCGATATGGGCTCTTAGATGAGAGTCAAAACAAGCTTGATTACGTCTTGGCTTTGACTATGGAGAACTTCCTTGAGCGTCGTCTTCAAACACTCGTCTGCAAATCTGGGATGGCCAAGTCTATTCATCATGCTAGGGTTCTCATCAGGAAGAGACATATCAGGAAATTAATTTCTATGTCTCTTTGGCTTGCTAGGGTTAGGAGGCAGGTGGTGAACATCCCTTCATTCATGGTTAGAGTTGATTCCCATAAGCACATTGACTTTTCACTTACAAGTCCTTTTGGGGGCGGTCGTCCTGGAAGAGTGAAGAGAAGGAACCAAAGGGCTGCTAAGAAGGCTACTGGCAGAGATGGAGATGAGGAGGATGAGGAGTAA 618 0.4644 MRETHQTNGKTFKKPRHPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRICNNARELLTLDEKNPRRIFEGEALLHRMFRYGLLDESQNKLDYVLALTMENFLERRLQTLVCKSGMAKSIHHARVLIRKRHIRKLISMSLWLARVRRQVVNIPSFMVRVDSHKHIDFSLTSPFGGGRPGRVKRRNQRAAKKATGRDGDEEDEE 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2309 205 Gene3D - 106 173 IPR036986 GO:0003723
Lele05g2309 205 MobiDBLite consensus disorder prediction 178 205 - -
Lele05g2309 205 SMART Ribosomal_S4_2 6 106 IPR001912 GO:0019843
Lele05g2309 205 TIGRFAM uS4_arch: ribosomal protein uS4 6 175 IPR005710 GO:0003735|GO:0006412|GO:0015935
Lele05g2309 205 Pfam Ribosomal protein S4/S9 N-terminal domain 8 106 IPR001912 GO:0019843
Lele05g2309 205 Pfam S4 domain 107 135 IPR002942 GO:0003723
Lele05g2309 205 SUPERFAMILY Alpha-L RNA-binding motif 10 167 - -
Lele05g2309 205 CDD S4 107 162 - -
Lele05g2309 205 PANTHER 30S 40S RIBOSOMAL PROTEIN 10 192 IPR022801 GO:0003735|GO:0015935|GO:0019843
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2309 Lele-ChrLele05 38261036 38263709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2309 5 195 Cytoplasmic Ribosomal Protein Gene Family AT5G39850 82.292 9.25e-110 311