Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2307 ATGACGGTGGTGTCGGATTCTTCTCCTGAGTCTTTCAGCCAGATGATGGCTTCTATGCCGGGGTTTCGATTCCATCCTACCGATGAGGAACTAATCATGTACTATCTGAAGAGGAAGATGTGTAGGAGGAGGCTGAAGCTCGATGTAATTCGTGAAACTGATGTCTACAAGTGGGATCCTGAGGAATTGCCTGGGCAGTCAGTGCTGAAAACTGGAGATAGGCAATGGTTCTTTTTCAGCCCCAGAGACAGAAAGTATCCTAATAGTGGTAGGACTAATAGAGCAACAAGGCAAGGGTACTGGAAAGCAACAGGGAAGGATCGTAACATTACCTACAATTCTCGAGCAGTTGGGGTGAAAAAGACCCTGGTTTTCTATAGAGGTAGAGCACCACATGGTGAGCGAACTGATTGGGTTATGCATGAGTACACATTGGAAGAAGAAGAACTTGCAAGATGCCAGAATTGTAAGGACTATTATGCACTTTACAAGGTGTTCAAGAAAAGCGGACCTGGTCCTAAAAATGGTGAACAATATGGTGCACCATTTGTAGAAGGAGAATGGGTAGATGACGACTTAGTAGATTTTAATGTTAGTTCAGCTGGCAAGGAGGCTCCGATTTCACAAGTCAATGAGGGTACTTCTGTTGATACTGTGACTTATAATGGTCAAGCTCAAGAGCAGCCTTTGTTTGATGATGAACTTGAAGAGATCTTGAAAAAGATGATGGATGAGCATGTTCCTGACCTGCCTCCACTGTGTCGTGCCGTACCTCAGGTGGCTGCTGAAGAAACACAAAGTGCGGTGGTAGATCAAATTTCTGAGGAGCTGACATTTGCTGAGCAAATCGAAATGTTTCATTCAAGCAGTCACTACCATGACCCTACCCTATCAGCTATCACGCACGTGCATGTTTCTGAAGCACCTGAAGTCACTTCTACTCCCAGTGTTCAAGTAGAGGAGCCTCTCTTTCGTGAGGATGACTTCTTGGAAATGAATGATCTCATTGATCCTGAACCAGCATTGCCCAGAATAGAAAATCCTTTGGAGAACTTAGAGTTTGAAAATGGATTAAGTACGCTTGACTTGTACCATGATGCAGAGATGTTTCTTCGAGACATGGGGCATATTGACCAGGAAACGGTTTCACATCCTTATATGAATACTTTTGACAGTAATTTTGTGAATCAGCATTATCAGTCTCTGCCTGTTGGAGACAATGCAGATCAAAGTGGTGAACTCTGGATGCATCATGAAAGGCACATCATGAGTCCAGCAGAACATTCTAATGTTTCTTTCTCTTCATCAAGCTCAGGTGCGAGTTATGAATCTGCCAGCTTGCCTGCCGAAGGTAATCGTAATCAAAGTGGCAGTGTGAGACAAGTTCCTACAAGTAGATTGTCTTCTGCTCTCTGGGCCTTCCTTGAGTCAATACCTACCACTCCTGCATCAGCTGCCGAAAATGCAAATCGGGCCCTCGAGCGGGTGTCTAGCTTTAGTAGGGTGAGAGATAATATGAAGCAGGCAAGCATAGTTGCTGCTAATGAAACTACAGTTGTGAAGAGAGCAGGTAAAGGAAGGGGAATCTTCTTCCGACTCTTGCCGGTTCTGGTTGCTTTATGTGCTTTTTTATGGGTTTCTATGGGAACATTGAGACTGCTTGGGAGATTCATCCCTTGA 1680 0.4446 MTVVSDSSPESFSQMMASMPGFRFHPTDEELIMYYLKRKMCRRRLKLDVIRETDVYKWDPEELPGQSVLKTGDRQWFFFSPRDRKYPNSGRTNRATRQGYWKATGKDRNITYNSRAVGVKKTLVFYRGRAPHGERTDWVMHEYTLEEEELARCQNCKDYYALYKVFKKSGPGPKNGEQYGAPFVEGEWVDDDLVDFNVSSAGKEAPISQVNEGTSVDTVTYNGQAQEQPLFDDELEEILKKMMDEHVPDLPPLCRAVPQVAAEETQSAVVDQISEELTFAEQIEMFHSSSHYHDPTLSAITHVHVSEAPEVTSTPSVQVEEPLFREDDFLEMNDLIDPEPALPRIENPLENLEFENGLSTLDLYHDAEMFLRDMGHIDQETVSHPYMNTFDSNFVNQHYQSLPVGDNADQSGELWMHHERHIMSPAEHSNVSFSSSSSGASYESASLPAEGNRNQSGSVRQVPTSRLSSALWAFLESIPTTPASAAENANRALERVSSFSRVRDNMKQASIVAANETTVVKRAGKGRGIFFRLLPVLVALCAFLWVSMGTLRLLGRFIP 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2307 559 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Lele05g2307 559 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Lele05g2307 559 FunFam Nac domain-containing protein 86 27 171 - -
Lele05g2307 559 MobiDBLite consensus disorder prediction 442 461 - -
Lele05g2307 559 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 288 - -
Lele05g2307 559 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Lele05g2307 559 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2307 Lele-ChrLele05 38178164 38181705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2307 4 556 NAC Transcription Factor Family AT1G34190 44.839 1.14e-147 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele05g2307 NAM 2.1e-36 No_clan