Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2300 ATGGCGTTGGATAGCCACATAGAGAAGATCCTTTGGAGTGAGGACCAAATCTCCCGCCGAGTTTCCGAGCTCGCGGCCCAAATTACCGACGATTTCTGTTCCTCTTCTCCTCCGCCCGTTTTTGTCGGCGTCGCTATCGGTGCCTTCTTGTTTTTGGCTGACCTTGTTCGCAAAATCAAGCTTCCAGTTTGCGTCGATTTTGTTCGAGCTCAGTCCTACGGTTCTGGAATCTGCTCCAATGGAGCACCGGTCGTTTCCTCTGATTTGAAGGTTGACGTCCAAGGCCGCCATGTAGTTCTGGTTGAGGACATTGTAGATACTGGGCATACCATATCTAGCGTAATTGCTCTCTTGAAAGCAAAGGGAGCATCCTCTGTCTCCGTGTGTACTTTTCTTGATAAACCAGCAAGAAGAAAGGTTAATATTCAGCTAGTTGGCGAGGGGAAGTTCTACAGTGGATTTGAGTGCCCAAATTATTTCGTTGTTGGCTATGGGTTGGATTTTGCTGAACTGTATAGGAACTTGCCTTATATTGGTGTCTTGAAGCCTGAACATTACAGTTGA 564 0.4716 MALDSHIEKILWSEDQISRRVSELAAQITDDFCSSSPPPVFVGVAIGAFLFLADLVRKIKLPVCVDFVRAQSYGSGICSNGAPVVSSDLKVDVQGRHVVLVEDIVDTGHTISSVIALLKAKGASSVSVCTFLDKPARRKVNIQLVGEGKFYSGFECPNYFVVGYGLDFAELYRNLPYIGVLKPEHYS 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2300 187 Pfam Phosphoribosyl transferase domain 16 168 IPR000836 -
Lele05g2300 187 TIGRFAM HGPRTase: hypoxanthine phosphoribosyltransferase 10 182 IPR005904 GO:0004422|GO:0006166
Lele05g2300 187 PANTHER HYPOXANTHINE-GUANINE PHOSPHORIBOSYLTRANSFERASE 4 186 - -
Lele05g2300 187 FunFam Hypoxanthine phosphoribosyltransferase 2 187 - -
Lele05g2300 187 SUPERFAMILY PRTase-like 4 186 IPR029057 -
Lele05g2300 187 Gene3D - 1 187 IPR029057 -
Lele05g2300 187 CDD PRTases_typeI 21 155 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2300 Lele-ChrLele05 38047816 38049916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2300 1 186 PRT Gene Family AT1G71750 63.452 3.43e-86 250