Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2296 ATGGCAAAGATTGAACAAGTCTCCTCTCTTTCACCTGATGGACAAGCCCTTCTTTCCCTTATATCTTCAGCAGACCCTTTTGCAAAATCCTCCTCTTCTGTTCTCTCTTCATGGAACTCTTCAAGCCAAACCCCTTGTTTATGGCATGGCGTTAATTGCTCCCCACAAGGTAGAGTCATTTCATTATCCGTTCCAAACACTTTCCTTAACCTTTCCTCTTTGCCTTCCCAGCTTTCTTCTTTATCATATCTGCAACTTCTCAATCTGTCTTCCACTAATGTGTCTGGATCCATCCCACCTTCTTTTGGCCAACTCTCCCATCTTCGCCTCCTTGACATCTCTTCAAATGCTCTCGCTGGTTCCATTCCTGAAGAACTCGGAAAACTCTCTTCGCTGCAGTTCCTTTACTTGAACTCCAATGGATTGACTGGAAGGATTCCTCATCAACTTGCTAATGTTACTTCACTTCAAGTTTTCTGCCTTCAAGACAATCTCCTTAATGGGTCAATACCATCACAATTAGGCTCTTTGACTTCGCTACAAGAGTTTAGAATTGGGGGTAATCCGTATCTAAGTGGTTCAATTCCACCACAATTAGGACTACTCGCCAATCTCACTACATTTGGGGCTGCAGCCACTGGTCTTTCGGGTGTTATTCCCTCTACATTCGGGAACTTGATCAATCTCCAAACGCTAGCGCTTTATAATACAGAAATTGCTGGTTCTATACCACCGGAGCTTGGCTTGTGTTCTGAGCTAACGAATCTGTATTTGCACATGAATAAGCTGACAGGTTCTATCCCACCTCAACTGGGTAAGTTACAAGAGCTTACTAGCTTGCTACTTTGGGGCAATGCCTTATCTGGGTCAATCCCTGCTGAGATTTCCAATTGTTCATCACTTGTTGTGTTTGATGCCTCTGCTAATGAACTTGTGGGTGAAATACCATATGATTTTGGAAAGCTGTTGGTTCTAGAACAGCTTCATCTATCAGACAATTCTCTCACAGGGAAAATACCATGGCAACTGAGCAACTGCACTAATCTTGCTACTCTTCAGCTTGACAAGAATCAGTTGTCAGGTACTATTCCATGGCAAGTTGGGAGATTGAAGTATTTGCAGAGTTTTTTCTTGTGGGGTAATTCAGTGTCTGGAAAAATACCTGCCACTTTTGGTAACTGTACAGAACTTTATACACTTGACCTTTCAAGGAACAAGCTAACAGGTTCAATTCCAGACGAAATTTTTGGCTTGAAGAAGCTGAGTAAGCTTTTGCTTCTGGGAAATTCCTTATCTGGTGAATTACCACGAAGCGTTTCAAATTGTGAGTCTCTAGTGAGATTGAGGCTTGGAGAAAATCAGCTTTCAGGACATATTCCTAGAGAGATTGGCCAACTGCAGAATCTGGTGTTCCTCGACTTGTACATGAACCATTTCTCAGGAAGCTTGCCGGAGGAGATTGGGAACATCACAGTTCTTGAGCTTTTAGATGTTCATAATAATCACATTACTGGGGATATCCCATCTCGGATTGGGGAGCTTGTAAATTTAGAGCAGCTAGATTGTAGTAGAAACAGTTTGACAGGTGAAATTCCTTGGATCTTTGGAAACTTAAGCTATTTGAACAAGCTCATTCTCAACAATAATTTACTCACAGGGTCAATCCCAAAATCCATTAGAAATTTGCAGAAGCTAACTCTATTGGATTTGAGTTACAATAACTTCTCCGGTGACATCCCATCTGAGATTGGTTATGTTCCAAGCTTAACCATCAGTTTGGACTTGAGCTCAAATGCATTTACAGGAGAAATCCCTGAGTCAATGAGTGGTTTGACACAGTTACAATCACTTGATCTTTCTCATAATTTGCTTTATGGAGGAATTAAGGTTCTTGGTTCCCTCATCAGTCTCACTTCCCTAAATATCTCCTACAACAATTTCTCAGGTCCTATCCCAGTAACCCGTTTCTTTAGAACCCTATCTTCAAATTCATATTTTGAGAATCCCCATCTATGTGAATCCCTCGATGGGACCACATGTTCTAGTCTGCTTCAAAGAAATGGTCTAAAATCTGCCAAAACCATAGCTATGATATTGGTAATTCTCGCCTCAGTTACCATAATTGTCATTGCATCTTGGATTTTGGTTACACGAAATCACAAGAATATGATGGAAAAATCTTTGGGGACATTAGCATCTGCTTCAGGAGCTGAGGATTTCTCATATCCTTGGACTTTCATCCCATTTCAGAAACTAAACTTCACAATAGATAATATCTTGGATTGCTTGAAGGATGAGAATGTGATTGGAAAGGGTTGCTCTGGCGTTGTATACAAGGCTGAAATGCCTAATGGGGAGTTGATAGCAGTAAAGAAGCTTTGGAAAGAAAACAAAGAGGAAGAAACTCTGGACTCTTTTGCTGCAGAAATTCAGATTCTTGGGCACATCCGGCATAGGAACATAGTGAGGCTCCTAGGTTATTGTTCTAACAGAAGTGTTAAACTTCTCTACAATTACATTCCAAATGGTAACCTAAGACAGCTGTTGCAAGGGAATAGGTACCTAGACTGGGAAACTAGGTACAAGATTGCGGTCGGTTCAGCTCAGGAGTATGGCTACACCATGAACATAACAGAGAAGAGTGATGTCTACAGTTATGGAGTGGTTTTGTTGGAGATACTGAGTGGGAGAAGTGCTGTTGAGTCCCATGTTGGTGATGGAGTACACATAGTTGAGTGGGTGAAGAGGAAGATTGGAAGCTTTGAACCAGCAGTGTCAATTCTAGACACAAAGCTCCAAGGCCTACCAGATCAAATGGTTCAAGAGATGCTTCAAACTCTTGGAATTGCCATGTTTTGTGTGAACTCTTCGCCTGCCGAAAGGCCCACAATGAAGGAAGTGGTGGCTCTGTTAATGGAGGTGAAGAGCTCAATTGAGGAGGTGGGAAAGACCTCTCAGCCTCTAATAAAGCAGTCCTCAAATCAAAGTTAA 2991 0.4176 MAKIEQVSSLSPDGQALLSLISSADPFAKSSSSVLSSWNSSSQTPCLWHGVNCSPQGRVISLSVPNTFLNLSSLPSQLSSLSYLQLLNLSSTNVSGSIPPSFGQLSHLRLLDISSNALAGSIPEELGKLSSLQFLYLNSNGLTGRIPHQLANVTSLQVFCLQDNLLNGSIPSQLGSLTSLQEFRIGGNPYLSGSIPPQLGLLANLTTFGAAATGLSGVIPSTFGNLINLQTLALYNTEIAGSIPPELGLCSELTNLYLHMNKLTGSIPPQLGKLQELTSLLLWGNALSGSIPAEISNCSSLVVFDASANELVGEIPYDFGKLLVLEQLHLSDNSLTGKIPWQLSNCTNLATLQLDKNQLSGTIPWQVGRLKYLQSFFLWGNSVSGKIPATFGNCTELYTLDLSRNKLTGSIPDEIFGLKKLSKLLLLGNSLSGELPRSVSNCESLVRLRLGENQLSGHIPREIGQLQNLVFLDLYMNHFSGSLPEEIGNITVLELLDVHNNHITGDIPSRIGELVNLEQLDCSRNSLTGEIPWIFGNLSYLNKLILNNNLLTGSIPKSIRNLQKLTLLDLSYNNFSGDIPSEIGYVPSLTISLDLSSNAFTGEIPESMSGLTQLQSLDLSHNLLYGGIKVLGSLISLTSLNISYNNFSGPIPVTRFFRTLSSNSYFENPHLCESLDGTTCSSLLQRNGLKSAKTIAMILVILASVTIIVIASWILVTRNHKNMMEKSLGTLASASGAEDFSYPWTFIPFQKLNFTIDNILDCLKDENVIGKGCSGVVYKAEMPNGELIAVKKLWKENKEEETLDSFAAEIQILGHIRHRNIVRLLGYCSNRSVKLLYNYIPNGNLRQLLQGNRYLDWETRYKIAVGSAQEYGYTMNITEKSDVYSYGVVLLEILSGRSAVESHVGDGVHIVEWVKRKIGSFEPAVSILDTKLQGLPDQMVQEMLQTLGIAMFCVNSSPAERPTMKEVVALLMEVKSSIEEVGKTSQPLIKQSSNQS 996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2296 996 Gene3D Transferase(Phosphotransferase) domain 1 751 869 - -
Lele05g2296 996 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 189 412 - -
Lele05g2296 996 ProSitePatterns Protein kinases ATP-binding region signature. 769 792 IPR017441 GO:0005524
Lele05g2296 996 Gene3D Ribonuclease Inhibitor 365 458 IPR032675 -
Lele05g2296 996 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 504 683 - -
Lele05g2296 996 Pfam Leucine rich repeat N-terminal domain 11 54 IPR013210 -
Lele05g2296 996 Gene3D Transferase(Phosphotransferase) domain 1 870 992 - -
Lele05g2296 996 PRINTS Leucine-rich repeat signature 611 624 - -
Lele05g2296 996 PRINTS Leucine-rich repeat signature 397 410 - -
Lele05g2296 996 SMART LRR_typ_2 562 586 IPR003591 -
Lele05g2296 996 SMART LRR_typ_2 394 418 IPR003591 -
Lele05g2296 996 SMART LRR_typ_2 322 346 IPR003591 -
Lele05g2296 996 SMART LRR_typ_2 105 129 IPR003591 -
Lele05g2296 996 SMART LRR_typ_2 466 490 IPR003591 -
Lele05g2296 996 SMART LRR_typ_2 153 177 IPR003591 -
Lele05g2296 996 SMART LRR_typ_2 514 537 IPR003591 -
Lele05g2296 996 SMART LRR_typ_2 274 298 IPR003591 -
Lele05g2296 996 SMART LRR_typ_2 226 250 IPR003591 -
Lele05g2296 996 SMART LRR_typ_2 611 638 IPR003591 -
Lele05g2296 996 FunFam Piriformospora indica-insensitive protein 2 413 503 - -
Lele05g2296 996 Pfam Leucine Rich Repeat 325 346 IPR001611 GO:0005515
Lele05g2296 996 Pfam Leucine Rich Repeat 516 538 IPR001611 GO:0005515
Lele05g2296 996 SUPERFAMILY Protein kinase-like (PK-like) 758 977 IPR011009 -
Lele05g2296 996 Gene3D Ribonuclease Inhibitor 561 672 IPR032675 -
Lele05g2296 996 Pfam Leucine rich repeat 373 431 IPR001611 GO:0005515
Lele05g2296 996 Pfam Leucine rich repeat 83 142 IPR001611 GO:0005515
Lele05g2296 996 Pfam Protein tyrosine and serine/threonine kinase 766 869 IPR001245 GO:0004672|GO:0006468
Lele05g2296 996 Pfam Protein tyrosine and serine/threonine kinase 870 970 IPR001245 GO:0004672|GO:0006468
Lele05g2296 996 Gene3D Ribonuclease Inhibitor 171 265 IPR032675 -
Lele05g2296 996 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 739 839 - -
Lele05g2296 996 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 10 173 - -
Lele05g2296 996 ProSiteProfiles Protein kinase domain profile. 763 996 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2296 996 Gene3D Ribonuclease Inhibitor 11 170 IPR032675 -
Lele05g2296 996 Gene3D Ribonuclease Inhibitor 459 558 IPR032675 -
Lele05g2296 996 Gene3D Ribonuclease Inhibitor 266 364 IPR032675 -
Lele05g2296 996 SUPERFAMILY RNI-like 280 666 - -
Lele05g2296 996 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 285 971 - -
Lele05g2296 996 SUPERFAMILY L domain-like 34 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2296 Lele-ChrLele05 38018343 38022747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2296 9 975 Receptor kinase-like Gene Family AT5G56040 40.535 0.0 697
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele05g2296 PK_Tyr_Ser-Thr 8.4e-06 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g2296 05 38018343 38022747 Lele07g2327 07 28217829 28221611 hybridization
Lele05g2296 05 38018343 38022747 Lele08g2178 08 26910625 26914448 hybridization