Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2277 ATGGGGTCTCACCAGGTTAAGCCATCTAGACCTGTGGAGAGGTTCGAATTACAAAATAATTATGCCGGAGATGGTGAATTTTTTGCTCATAGACGATCCACGGGGCAGAAATTTGATCGGACGAAGTATGGCCCGCAAAACCAGCGAGAACCCATTAAGCATAAGGTTGAATCTGGTACTGGCAATGATCAAAGACAGGATGGTGACGTTGTTAGATTTAAGGGGAAATTGAATAACAGAGAGGGAAAGAAGGATGCTGTGCGTAATCATTCGAAGGTATCAAGGAAGTCTTTTGAAGATGAGATGGTTGATGGATGGCCCAAATGGCTAGTTGATAACGTTCCAAAGGAAGCATTGGATGGCGTGATTCCCAAGAGTGCTGAATCGTACATTATGATTAATAAGATAGGGCAGGGAACTTATAGCAATGTTTATAAAGCTCGAGATCGAAACACTGGAGAATTAGTGGCCCTGAAGAAGGTGCGCCTTGACACATCAAAGCCCGAATGCATTAAATTCATGGCAAGAGAAATTATGATATTACGGAAGTTGGATCATCCCAATGTAGTAAAACTCAAAGGATTGGCTACTTCAAGAATGCATTATAGTCTTTATCTCGTTTTTGACTTCATGCAAACAGATTTGGCTAGAATAGTTTCTCGTCCTGAAGAGAGATTAACTGAACCACAGGTCAAGTCCTACATGCATCAACTGCTTTCAGGTGCCACTGATTATGGAGTTGGTGTTGATTTATGGAGTGCTGGATGCCTCCTGGCAGAAATGTTCACAGGGGTTCCGATTATGCCTGGTAGAACAGAGGTGGAGCAACTTCATAGAATTTTTAGGTTATGTGGGACGCCATCAGAGGGTTATTGGAAAAAATTCAAAGCTTCTGGGACTTTTAAGCCTCCAAAGTCTTATAGACCCTGCCTTGTAGAGACTTTCAAAGATCTCCCTTCTTCTTCTTTGGTTCTATTATGTACTCTGCTTGCCTTGGATCCTGCTTACCGTGGAACCGCATCTAAAGCTCTCCAAAATCAATTTTTCTATACAAGTCCTTTGGCATGTGACCTCTCTGGTCTTCCTGTGATCTGCAATGAAGAAGAGCAAGATCAAGCAGATGAACAAATCAAGCGCATGAATTCTAAAATTAGACGCTCACGTGCATTACTTGAGCGTCGTAGAAAGAACCTGTTATCTGAAAAGCCAGCAGAACCCACTATGTCTACTAAAGAGGAATCAAGTAAGAATGCTGATACATACGTCCCACGTCATGAACAGGGTAGCACAACCACAACCACAACCAGTAGTACCTTATCAAGTTTGAATCCTACTGAGGCAAAGGATTCTTCACCTATCTTCTCTCCCGATGTGTCCTCACAGCAAAAGCTGCTCCTCAAAACCCTTCGTGATGATAGTGGTGGTGAAAACATTGATAAGTTTCCTCCTTTTCCTAAGTTGAAATCACGTGCAGTCGCCGGAGGAGAAGATACTATGCACAAATTTCGCCCCGTCTGCAGGTCTTCTTCCACCAGAGATTTCAGTTTCTCAAAACAAAGGGACCGTTTACTCCTTGAAACAGAGGATGAGACTCAATAG 1599 0.4284 MGSHQVKPSRPVERFELQNNYAGDGEFFAHRRSTGQKFDRTKYGPQNQREPIKHKVESGTGNDQRQDGDVVRFKGKLNNREGKKDAVRNHSKVSRKSFEDEMVDGWPKWLVDNVPKEALDGVIPKSAESYIMINKIGQGTYSNVYKARDRNTGELVALKKVRLDTSKPECIKFMAREIMILRKLDHPNVVKLKGLATSRMHYSLYLVFDFMQTDLARIVSRPEERLTEPQVKSYMHQLLSGATDYGVGVDLWSAGCLLAEMFTGVPIMPGRTEVEQLHRIFRLCGTPSEGYWKKFKASGTFKPPKSYRPCLVETFKDLPSSSLVLLCTLLALDPAYRGTASKALQNQFFYTSPLACDLSGLPVICNEEEQDQADEQIKRMNSKIRRSRALLERRRKNLLSEKPAEPTMSTKEESSKNADTYVPRHEQGSTTTTTTSSTLSSLNPTEAKDSSPIFSPDVSSQQKLLLKTLRDDSGGENIDKFPPFPKLKSRAVAGGEDTMHKFRPVCRSSSTRDFSFSKQRDRLLLETEDETQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2277 532 MobiDBLite consensus disorder prediction 26 68 - -
Lele05g2277 532 MobiDBLite consensus disorder prediction 390 409 - -
Lele05g2277 532 MobiDBLite consensus disorder prediction 390 459 - -
Lele05g2277 532 Gene3D Transferase(Phosphotransferase) domain 1 238 388 - -
Lele05g2277 532 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Lele05g2277 532 MobiDBLite consensus disorder prediction 508 532 - -
Lele05g2277 532 MobiDBLite consensus disorder prediction 30 68 - -
Lele05g2277 532 MobiDBLite consensus disorder prediction 514 532 - -
Lele05g2277 532 Gene3D Phosphorylase Kinase; domain 1 123 226 - -
Lele05g2277 532 PANTHER CELL DIVISION PROTEIN KINASE 238 353 - -
Lele05g2277 532 SUPERFAMILY Protein kinase-like (PK-like) 125 353 IPR011009 -
Lele05g2277 532 FunFam probable serine/threonine-protein kinase At1g54610 117 212 - -
Lele05g2277 532 ProSiteProfiles Protein kinase domain profile. 130 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2277 532 MobiDBLite consensus disorder prediction 410 459 - -
Lele05g2277 532 Pfam Protein kinase domain 243 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2277 532 Pfam Protein kinase domain 132 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2277 Lele-ChrLele05 37411423 37415676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2277 170 390 Core Cell Cycle Gene Families AT5G64960 29.836 4.33e-33 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Lele05g2277 Pkinase 2.9e-22 CL0016