Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2267 ATGGAGGCGGCGGCGACGGCCGCTAAGGAGGAGGAAGAGGAGGGCGGTGTGTTTTCTGGATATAGCAGTAACAGAGGTGAGTTGACGGCGATGGTTTCGGCGCTGACGCATGTGGTGTCAGGATCTGGTGGTCAGGGACGCACCGAATGGATCCCTGTGACATCAACTCTTGGCCAGCCTTCTCCTTCTTCTACAGTTTTGTCGACATACTTGTCGTCGTCGTCTTCTTCATCATCATCTTCTTCGAATGCTTCAGGCTCTGTTTTAAGCTCTGCCTCTGGTTCTACCGCCTCCTGGGTTGGCCACAAACGAGCACGTGAGCAACACAGTTCTGTCTATGGATCTTTCAGCGACTTCAGAGTTCCTTCTCAGGGACAATCATCTTCAGTAGCAGAGGAGGGGACGGATGTTGCGGCAAGTAAGGTGGTGGAGACAGTGGCAGCGACGGCTGAGAAAAGTGAAGAAAGGAGGAGGAGGTACAGAGGAGTGAGGCAGAGGCCGTGGGGGAAATGGGCGGCGGAAATTCGGGATCCTCACAAGGCGGCTAGAGTCTGGCTTGGAACATTCGACACAGCGGAGGCCGCCGCCAGAGCTTATGATGAAGCTGCATTGAGATTCCGAGGGAACAGAGCAAAATTGAATTTCCCGGAAAATGTCAGAGTTGTGCCCCCTGCTCACAATTTTCAGGCCACTCGCCTGGCGGTATCAGATTCTCCGGGGACTCATTTCCAACATCAGACTCCTAATCTTCCTCCTCCACCTCCTCCCCCACAGCAGCCGCCGTTCTCACAGTCACCGTCTTTTCAGTCGCAATCAGATTTGATCAGAGACTACTGGGAATACTCTCAACTTCTCCAGAGCAGCTCCGATGCATTCCAACAACAGCAACAAACTCAGCAACAGCACCAACAACAACATTCAAATTTGCTGCAACAATGGGTCTACAATTCCCAATTGGCGGCGCTTCAATCGTCTTCTTTGTTTTTATCATCGTCGCCTCTTTCTTCTTCATCATCACCAACAGCATTCTCACCTTCTAGCCAGCTATCCTCTGCTTCATATCCTTTGTTTTCCAGTCAGCAAACAGGATACTTCCAACCAACACTGGGAAACCAACTGCGTGGTGGCGACATCGGCGGCAGCGACAGCACAGACTTTCCGGCATCAACGTGGTCAGATACCGGGGGCTACCCGCCTCCATCGGGTTCAGGCTGA 1215 0.5259 MEAAATAAKEEEEEGGVFSGYSSNRGELTAMVSALTHVVSGSGGQGRTEWIPVTSTLGQPSPSSTVLSTYLSSSSSSSSSSSNASGSVLSSASGSTASWVGHKRAREQHSSVYGSFSDFRVPSQGQSSSVAEEGTDVAASKVVETVAATAEKSEERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPENVRVVPPAHNFQATRLAVSDSPGTHFQHQTPNLPPPPPPPQQPPFSQSPSFQSQSDLIRDYWEYSQLLQSSSDAFQQQQQTQQQHQQQHSNLLQQWVYNSQLAALQSSSLFLSSSPLSSSSSPTAFSPSSQLSSASYPLFSSQQTGYFQPTLGNQLRGGDIGGSDSTDFPASTWSDTGGYPPPSGSG 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2267 404 MobiDBLite consensus disorder prediction 246 263 - -
Lele05g2267 404 MobiDBLite consensus disorder prediction 1 23 - -
Lele05g2267 404 MobiDBLite consensus disorder prediction 39 104 - -
Lele05g2267 404 MobiDBLite consensus disorder prediction 116 134 - -
Lele05g2267 404 ProSiteProfiles AP2/ERF domain profile. 159 216 IPR001471 GO:0003700|GO:0006355
Lele05g2267 404 PANTHER DNA-BINDING DOMAIN 91 308 IPR044808 GO:0003700|GO:0009873
Lele05g2267 404 MobiDBLite consensus disorder prediction 383 404 - -
Lele05g2267 404 PRINTS Ethylene responsive element binding protein signature 160 171 IPR001471 GO:0003700|GO:0006355
Lele05g2267 404 PRINTS Ethylene responsive element binding protein signature 182 198 IPR001471 GO:0003700|GO:0006355
Lele05g2267 404 MobiDBLite consensus disorder prediction 237 269 - -
Lele05g2267 404 MobiDBLite consensus disorder prediction 116 137 - -
Lele05g2267 404 SUPERFAMILY DNA-binding domain 159 217 IPR016177 GO:0003677
Lele05g2267 404 MobiDBLite consensus disorder prediction 365 404 - -
Lele05g2267 404 MobiDBLite consensus disorder prediction 39 98 - -
Lele05g2267 404 FunFam Ethylene-responsive transcription factor 2 158 217 - -
Lele05g2267 404 Pfam AP2 domain 159 208 IPR001471 GO:0003700|GO:0006355
Lele05g2267 404 MobiDBLite consensus disorder prediction 1 16 - -
Lele05g2267 404 Gene3D AP2/ERF domain 158 218 IPR036955 GO:0003700|GO:0006355
Lele05g2267 404 SMART rav1_2 159 222 IPR001471 GO:0003700|GO:0006355
Lele05g2267 404 CDD AP2 167 218 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2267 Lele-ChrLele05 37173556 37174891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2267 151 223 AP2-EREBP Transcription Factor Family AT2G33710 79.452 2.47e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g2267 AP2 7.9e-15 CL0081