Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2264 ATGAATTTTGCTCAGGTACTTCAAATTTTTCTGGTTGTTTTAAGGGTAAGTCAAGTCAGATTTTCGTTTTTCAAGGTCTTAATTCTGAATCGTGCAGACAATTCTGATGATAATTTTGAGCCAAAACCCCATTGTGCACAACGGGCAGCATGTTTTAGCGTACTAGGGTTTAGCGCCGCTTCTCCGGGCTGGTTGGCTACTTCGCCGCAGGAGCAACTACAGGAGAGGAGAAGGATGTCGCACAGGAAGTTCGAGCACCCCAGGCATGGTTCTCTGGGATTTCTACCCAGGAAGCGCGCTGCTCGTCACAGGGGAAAAGTGAAAGCGTTCCCCAAGGATGACCCAAGCAAGCCACCCAAGCTTACAGCCTTCTTGGGTTACAAGGCTGGCATGACTCACATTGTAAGAGAGGTCGAGAAACCAGGGTCAAAACTTCACAAGAAGGAAACCTGTGAACCTGTTACAATTATTGAGACACCGCCAATGGTCATTGTTGGAGTTGTGGGTTATGTGAAAACTCCTCGTGGCCTTCGGACATTGAGCACTGTATGGGCTCAGCATTTGAGTGAGGATGTAAAGCGTAGGTTCTATAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCCTGAAGTACTCCAAGCAGTACGAATCTGAAGAAGGCAAGAAAAGCATTCAGGCTCAGCTTGAGAAAATGAAGTATGCTTCAGTTGTTCGTGTTTTGGCTCACACCCAGATTAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGCACTATTGCACAGAAGGTGGACTATGCATACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTATTCCAGAAGGATGAGATGATCGATCTCATTGGTGTTACTAAGGGTAAAGGGTACGAAGGTGTTGTCACACGTTGGGGTGTGACTCGTCTTCCCCGCAAAACTCACAGGGGTCTTAGGAAAGTTGCATGTATTGGCGCCTGGCATCCTGCCAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGCACAGAGTTGAACAAGAAGGTTTACAGGCTCGGGAAAGCTGGAGATGAGTCTCATACTGCTATCACTGACTATGATAGGACTGAGAAGGACATAACTCCAATGGGTGGCTTCCCTCACTATGGTATTGTGAAGGACGACTTTGTGATGATCAAGGGGTGCTGTGTTGGTCCCAAGAAAAGGGTTATCACATTGCGCCAATCCCTCCTTAAGCAAACTTCTCGTGTTGCTTTGGAGGAGATCAAGCTCAAGTTTATCGACACATCTTCCAAGTTTGGCCATGGCCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTTGGACGTCTCAAGGCATAA 1401 0.4704 MNFAQVLQIFLVVLRVSQVRFSFFKVLILNRADNSDDNFEPKPHCAQRAACFSVLGFSAASPGWLATSPQEQLQERRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLSTVWAQHLSEDVKRRFYKNWCKSKKKAFLKYSKQYESEEGKKSIQAQLEKMKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYRLGKAGDESHTAITDYDRTEKDITPMGGFPHYGIVKDDFVMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2264 466 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 79 461 IPR045077 GO:0003735|GO:0005840|GO:0006412
Lele05g2264 466 Gene3D - 161 284 - -
Lele05g2264 466 Gene3D Translation factors 122 462 - -
Lele05g2264 466 FunFam 60S ribosomal protein L3 79 152 - -
Lele05g2264 466 FunFam Ribosomal protein L3 342 466 - -
Lele05g2264 466 ProSitePatterns Ribosomal protein L3 signature. 289 312 IPR019926 -
Lele05g2264 466 FunFam 60S ribosomal protein L3 161 284 - -
Lele05g2264 466 FunFam 60S ribosomal protein L3 122 243 - -
Lele05g2264 466 Pfam Ribosomal protein L3 79 447 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele05g2264 466 FunFam 60S ribosomal protein L3 303 351 - -
Lele05g2264 466 Gene3D Ribosomal protein L3, domain 3 79 351 IPR044892 -
Lele05g2264 466 SUPERFAMILY Translation proteins 82 447 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2264 Lele-ChrLele05 37040977 37046634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2264 79 464 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 86.047 0.0 694