Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2263 ATGATTTTTGCTTCCCCTCTCTGGGTCACCCCTTCGCCGCAGAAGCATTATCAGGAGAGGAGTAGGATGTCGCACAGGAAGTTCGAACACCCCAGGCATGGTTCTCTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGCCACCCAAGCTTACCGCCTTCTTGGGTTACAAGGCAGGCATGACTCACATTGTTAGAGAGGTCGAGAAACCTGGGTCAAAACTTCACAAGAAGGAAACCTGTGAGCCTGTTACAATTATTGAGACGCCTCCAATGGTTATTGTTGGAGTTGTGGGTTATGTGAAGACTCCTCGTGGCCTTAGGACATTGAGCACTGTATGGGCTCAGCATTTGAGTGAGGATGTGAAGCGTAGGTTCTATAAGAACTGGTGCAAATCAAAGAAGAAGGCTTTCTTGAAGTACTCCAAGCAGTATGAATCTGAAGAAGGAAAGAAAACCATTCAGGCTCAACTTGAGAAACTGAAGAAGTATGCATCAGTTGTGCGTGTTTTAGCTCACACCCAGATTAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGTACAATTACACAGAAGGTGGACTATGCATACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTATTCCAGAAGGATGAGATGATCGATCTCATCGGTGTAACAAAGGGTAAAGGGTACGAAGGTGTTGTCACTCGATGGGGTGTGACCCGTCTTCCCCGCAAGACTCACAGGGGTCTGAGGAAAGTTGCATGTATTGGTGCCTGGCATCCTGCTAGAGTTTCTTTCACAGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGAACAGAGTTGAACAAGAAGGTTTACAGGCTCGGGAAAGCTGGAGATGAGTCACACACAGCTATTACTGATTTTGACAGGACTGAGAAGGACATTACTCCAATGGGTGGCTTCCCTCACTACGGTATTGTGAAGGATGACTTTGTCATGATCAAGGGATGCTGTGTTGGTCCCAAGAAAAGGGTTATCACACTGCGCCAATCTCTTCTTAAGCAGACTTCTCGTGTTGCTTTGGAGGAGATCAAGCTCAAGTTTATCGACACATCTTCCAAGTTTGGCCATGGCCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTCGGCCGTCTCAAGGCATAA 1236 0.4757 MIFASPLWVTPSPQKHYQERSRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLSTVWAQHLSEDVKRRFYKNWCKSKKKAFLKYSKQYESEEGKKTIQAQLEKLKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTITQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYRLGKAGDESHTAITDFDRTEKDITPMGGFPHYGIVKDDFVMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2263 411 FunFam 60S ribosomal protein L3 248 296 - -
Lele05g2263 411 FunFam 60S ribosomal protein L3 105 229 - -
Lele05g2263 411 Gene3D Translation factors 66 407 - -
Lele05g2263 411 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 23 406 IPR045077 GO:0003735|GO:0005840|GO:0006412
Lele05g2263 411 ProSitePatterns Ribosomal protein L3 signature. 234 257 IPR019926 -
Lele05g2263 411 FunFam 60S ribosomal protein L3 23 96 - -
Lele05g2263 411 FunFam 60S ribosomal protein L3 66 167 - -
Lele05g2263 411 Pfam Ribosomal protein L3 23 392 IPR000597 GO:0003735|GO:0005840|GO:0006412
Lele05g2263 411 Gene3D - 105 229 - -
Lele05g2263 411 FunFam Ribosomal protein L3 287 411 - -
Lele05g2263 411 SUPERFAMILY Translation proteins 26 392 IPR009000 -
Lele05g2263 411 Gene3D Ribosomal protein L3, domain 3 23 296 IPR044892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2263 Lele-ChrLele05 37037735 37040859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2263 23 409 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 85.530 0.0 693