Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2248 ATGCACTTCATGGCTTTGGACACTTCAAATCCTGCGGCATTTGTAAATGCAGAGGTGCTTTCAAATTTCATAGGGACGAAAGTTCAAGCCGTTGTTCAAGTTCATCAATCAGCGGTGTTGCCATTGGAAAAATCCACATATGGCAATCAGCTAACTGTGAAAGGGTTGCCACAGGTTCCTGCTATGAATTATGTTGAGGTGATTGGTATTGCAGAGAGTAACCAATTGATTAAGGCTGAGATATGGACTGACTTTGGCAACACATTCGATATAAAGCACTACAAAATGGTAGTTGCTGCTTTTATTCCTATTGCTCTGCTTTCTTGTTGTGCATTTATATATTGCCTTTGA 351 0.4017 MHFMALDTSNPAAFVNAEVLSNFIGTKVQAVVQVHQSAVLPLEKSTYGNQLTVKGLPQVPAMNYVEVIGIAESNQLIKAEIWTDFGNTFDIKHYKMVVAAFIPIALLSCCAFIYCL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2248 116 SUPERFAMILY Nucleic acid-binding proteins 11 98 IPR012340 -
Lele05g2248 116 Gene3D - 7 102 IPR012340 -
Lele05g2248 116 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 4 97 - -
Lele05g2248 116 Pfam Replication factor A protein 3 10 98 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2248 Lele-ChrLele05 34282729 34283172 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2248 6 94 Core DNA Replication Machinery Family AT4G18590 53.333 6.81e-30 101