Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2213 ATGCCAGTAGCGAAACTTAAAGCTTCTAGCAGTCCAGATGTCATGAAAGCAGAGGTTGGAAATGATACGTTAGATGCCATAATCAAACAAGGAATTGGCAAAGAACATTTCCTTTCTTTTTCAAGGGCTGGTGACCGTCCTGTGCAGTGGATTCAATTACTCCAGGCTTTAGATCAACAAGAACTCCCAGGTTGGCCTGTGCTCACTCCTCTGAAGGTTCAATTGCAGAAGTGTGACAAGTGCTCCCAAGAATTTTGCTCTCAAATTAACTACCGAAGACATCTTCATGTGCAACATAGATTGAAAAAACTTGATAAGGATTCTACAAACAACAGGGATATGTTAGGAGTATACTGGGATAAGGGTCTACAATTTTACAAGCTTATTGGAAAACAAGGATTTTCATCATTTCCACATTATTTGAAGGCTGGTTCTGCCCTTTTGGATATTGCTCAAGCTAGATACAGTTTTCCTATATCTTCACAGGAGTTGTTTGGTGTACTTGATGATGCCAGTGAACAAACATTTTTATGTGGAAATGCATTTTCTATGCAGAAATATATTTTTGATGGAGAGGCTGGAAAGATTAGTCTTGAACAAAAAAACGCTGTTGCTTGCACAAGTTTCTTGCTAGAGCAGATATTGGTAAAAGCATGGCTTGCTGACAAGGATGTTGAAGCATTAAGATGGCAGAAGCTACTGGTGGAAGAAGAAGAAGCTGCTCAGAAAAGACAAGCTGAGATTTTGGAGAAGAAACGCCAGAAAAAGCTTAGGCTTAGGCAAAAAGAACAGAGGGTGAGGGAGCAAAGACATAAAGATGAGGCAGAAGTTAAAGAGAATATTAGTAGCACTGTAGAGGCTGTATCACCAGCTGAAGCATCTTTGGATTCATCTGACTTTGAAGAACATAATGAAAATACATTTCAAAGCCCAGACACCAAAGAAGTTTTAGATGGGATGAATTCTCAGTCAAGCTATCGATGTGCAGTGGTTGCTCAGTGGCAGGCACTGCCGAAATCACAATTTACTGTAGCTAACACTCACCATACAAACCAGAATTCTCAAATTCTGAAATTTGGAGTCATGAAGAGGCATGGAACCTGCTGCGACCAAAGGGCAGCTCCTATAGTTACTGGAGAACTGCATGGTCAGAATCTGAACAAGGAGAGTAGTGCTCAGGAGAAGTCAGCTGTCGAGAATGGCAACAATCGGTTAGCAATTAAACTTTGGTGGCCTGTTGGCCGACATGGATCAAAAGATAAAAATTCAGTTCAAAACGGTGGTAAAGAAGCTTATTCAATTACCAGAAAGGGAGATGATCCAAACTTATCAGATGAAAGTTGTTTAAGGTTGTGTGACATAGATAATAGTATTAGTATTTTTGAGAAAAATTCTTCCCTCCAAGAGGACTGTGCAGGACCCGGAAGCTTACAACAACTATCCAGCAATGCTGCAAAAGCCTTTTTAGCACAAAGATGGAAAGAAGCCGTTTCATTAAATTATTTGACGTTGGTTCTTTCACCTGATTCCTATCCTCCAAGCTGTCACAAGATGCAGGATCTTGAACAGGTAATATGTCAATCTTCGAATGTCAACAGTCAAGGCATCCTTGTAAGTTCAGAGAACCACTTGTCTGCCTCTTCAGAAGGTACTAGATACAAACTTAGAGTGAAACCTGAGAAGGGTATCAAAATAAAGTACATTCCCAAACAGAAAGCAGCAACCTATTAG 1731 0.4027 MPVAKLKASSSPDVMKAEVGNDTLDAIIKQGIGKEHFLSFSRAGDRPVQWIQLLQALDQQELPGWPVLTPLKVQLQKCDKCSQEFCSQINYRRHLHVQHRLKKLDKDSTNNRDMLGVYWDKGLQFYKLIGKQGFSSFPHYLKAGSALLDIAQARYSFPISSQELFGVLDDASEQTFLCGNAFSMQKYIFDGEAGKISLEQKNAVACTSFLLEQILVKAWLADKDVEALRWQKLLVEEEEAAQKRQAEILEKKRQKKLRLRQKEQRVREQRHKDEAEVKENISSTVEAVSPAEASLDSSDFEEHNENTFQSPDTKEVLDGMNSQSSYRCAVVAQWQALPKSQFTVANTHHTNQNSQILKFGVMKRHGTCCDQRAAPIVTGELHGQNLNKESSAQEKSAVENGNNRLAIKLWWPVGRHGSKDKNSVQNGGKEAYSITRKGDDPNLSDESCLRLCDIDNSISIFEKNSSLQEDCAGPGSLQQLSSNAAKAFLAQRWKEAVSLNYLTLVLSPDSYPPSCHKMQDLEQVICQSSNVNSQGILVSSENHLSASSEGTRYKLRVKPEKGIKIKYIPKQKAATY 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2213 576 MobiDBLite consensus disorder prediction 261 319 - -
Lele05g2213 576 MobiDBLite consensus disorder prediction 418 438 - -
Lele05g2213 576 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 306 379 - -
Lele05g2213 576 Coils Coil 234 272 - -
Lele05g2213 576 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Lele05g2213 576 MobiDBLite consensus disorder prediction 261 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2213 Lele-ChrLele05 22209055 22213659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2213 20 572 C2H2 Transcription Factor Family AT4G25610 35.881 1.09e-103 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele05g2213 None None None