Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2203 ATGATGCAGCTCGGAAACCTGACCACAGTCGTATCAGGGATGGGCGCTAAGGCCGACGAAGCACCGCCTCCTCCACCACCGCCACCGCCGGAAGCCTTGGAGGAGCCAGACGGAGGAGTTGAGATAATAATTGGGATGGATAATACAGCAGCAACCACAACTTCATCAGGTAAAGGTGACAAGATGAACAGTGGAGGGAACCGGTGGCCCCGCCAAGAGACTTTGGCTCTGTTGAAGATAAGGTCTGATATGGATTCTGTGTTTCGAGATTCAAGTCTTAAAGGTCCACTCTGGGAAGAAGTTTCAAGGAAGCTTGGAGAGCTTGGTTATCAGAGAAGCGCAAAGAAGTGCAAGGAGAAATTCGAGAACGTGTACAAGTACCACAAGAGAACCAAAGATAGCAGAAGTGCCAAACCAGAAGGAAAGACCAAAACCTATAGGTTTTTCGATCAATTAGAAGCTTTTGAATCTCGCTTCACTGTATCTCATCACTATCAATTTCATCATCATCCAAAATCTTCATCACAACCTTCTAATTTGCCTCCAAATACAGTTATCTCATTGCCATTTCTCTCAAGGCCTAGTGATCTTTCATCAACTACCTTCTCTTACGTCACTTGTGGGACAACGACTTCTACTAATACAACTGTTCCATCCTCAAATAATCCACCGACGGTGCCAAATGTGAACCTTTCGACCTCGACCTCATCGTCTACGGCCTCCGACGAGGACCTGGAAGAGAGGTACAGGAAGAAGAGGAAGTGGAAGGACAACTTCAAGAGGCTTACAAGGAAAGTGTTGGCAAGACAGGAGGAGATGCAGAAGAGGTTCTTGGATGCCATTGACAAACGAGAACGCGAGCGTGTGGCTCAAGAGGAATCTTGGAGGATGCAAGAGATGTCTCGGATCAACCGTGAACGAGAAATCCTCGTCCAAGAAAGATCCACCGCCGCCGCCAAGGATGCCGCCATTATTGCATTTTTACAGAAGTTGTCCTGCGGATCACAGACGCCACCAGTGTTCTTGATGTCGCAGTTTCAACCACAAACACAACAACAACAGCAACAAAACCAGCAACCACGGTTGCTAGTGATTCCGAATAACAACATTAGCTATGAAAGGTTTGAAATCCAGAAAATGAATGACAACAATCACAATATCAACCGCAATAGCGGGGCCTGTGGCGCTTCTTCGCGGTGGCCAAATGCGGAGGTACATGCATTGATAAGATTGAGGACGAGTCTGGAGGCTAAGTATCAGGAAAGCGGTCCTAAGGCTCCACTGTGGGAAGAGATATCAAGTGAATTGCAGAAGTTGGGATACAATAGGAGTGCCAAGAGGTGCAAGGAGAAGTGGGAAAACATCAATAAGTACTTTAAGAAGATCAAAGAAACCAACAGAGAAAGGCGCGATGACAGTAAGACATGTCCTTACTTCAATGAACTCGACGCTTTGTACAAAGAAAAGACCAAAATCCAGAACAACAACAACCTCTTCAGTAATTCGTTTGGTCACAATGTGGAGCCACTAATGGTGCAGCCGGAGCAGCAATGGAGGCCTCCCACTCAAGAAGAAGAAGCTGCAAGGGATTATGTAAATCAGTATCAAGAATGTGAAGAAGAAGAAGAAAAAGAAGACGAGGAGGAGGATGAAGGTGGAATTGAAGTAGAAGGAGGAGGAAGTGTTGACTTAGAAGATGAAGAAGTAGGAGGAGGAGGCCACGGCGGTGATAGTGGCGGTGACGGTGATTATGAGAATAATATCTCCATAAAAAAGCTTTCTTCAGTGGACACTGTTGAATGA 1803 0.4615 MMQLGNLTTVVSGMGAKADEAPPPPPPPPPEALEEPDGGVEIIIGMDNTAATTTSSGKGDKMNSGGNRWPRQETLALLKIRSDMDSVFRDSSLKGPLWEEVSRKLGELGYQRSAKKCKEKFENVYKYHKRTKDSRSAKPEGKTKTYRFFDQLEAFESRFTVSHHYQFHHHPKSSSQPSNLPPNTVISLPFLSRPSDLSSTTFSYVTCGTTTSTNTTVPSSNNPPTVPNVNLSTSTSSSTASDEDLEERYRKKRKWKDNFKRLTRKVLARQEEMQKRFLDAIDKRERERVAQEESWRMQEMSRINREREILVQERSTAAAKDAAIIAFLQKLSCGSQTPPVFLMSQFQPQTQQQQQQNQQPRLLVIPNNNISYERFEIQKMNDNNHNINRNSGACGASSRWPNAEVHALIRLRTSLEAKYQESGPKAPLWEEISSELQKLGYNRSAKRCKEKWENINKYFKKIKETNRERRDDSKTCPYFNELDALYKEKTKIQNNNNLFSNSFGHNVEPLMVQPEQQWRPPTQEEEAARDYVNQYQECEEEEEKEDEEEDEGGIEVEGGGSVDLEDEEVGGGGHGGDSGGDGDYENNISIKKLSSVDTVE 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2203 600 SMART sant 396 458 IPR001005 -
Lele05g2203 600 SMART sant 65 127 IPR001005 -
Lele05g2203 600 Coils Coil 524 551 - -
Lele05g2203 600 FunFam Trihelix transcription factor GT-2 400 461 - -
Lele05g2203 600 MobiDBLite consensus disorder prediction 47 70 - -
Lele05g2203 600 Gene3D - 400 461 - -
Lele05g2203 600 Gene3D - 69 130 - -
Lele05g2203 600 MobiDBLite consensus disorder prediction 515 600 - -
Lele05g2203 600 CDD GT1 398 463 - -
Lele05g2203 600 MobiDBLite consensus disorder prediction 19 34 - -
Lele05g2203 600 Pfam Myb/SANT-like DNA-binding domain 398 485 IPR044822 -
Lele05g2203 600 Pfam Myb/SANT-like DNA-binding domain 67 154 IPR044822 -
Lele05g2203 600 FunFam Trihelix transcription factor GT-2 69 130 - -
Lele05g2203 600 PANTHER FI21293P1 31 544 - -
Lele05g2203 600 MobiDBLite consensus disorder prediction 211 249 - -
Lele05g2203 600 MobiDBLite consensus disorder prediction 536 564 - -
Lele05g2203 600 MobiDBLite consensus disorder prediction 211 240 - -
Lele05g2203 600 ProSiteProfiles Myb-like domain profile. 398 456 IPR001005 -
Lele05g2203 600 MobiDBLite consensus disorder prediction 1 70 - -
Lele05g2203 600 CDD GT1 67 132 - -
Lele05g2203 600 ProSiteProfiles Myb-like domain profile. 61 125 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2203 Lele-ChrLele05 19874650 19877025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2203 65 518 Trihelix Transcription Factor Family AT1G76880 47.106 8.95e-133 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele05g2203 Myb_DNA-bind_4 6e-22 CL0123