Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2175 ATGGCTGATGACTGGGATCTCTCCGCCGTCGTGCGAGGTTGCAGATCCTCCTCCTCCACAGCCTCCGCCGCCTCCAGCACCTCTACAACTATTACAACGCTGCCGTCTTCTTCATCCAAGGCCGTTTCTTTACCATTAACCAAGCAAGAAAATGACGTTTTCTCTTTTCCCAGTTTGATTCAACCCACAACCAATGGGTTCCAAGAACTTCACCAATTGTTCAGACCCTTTATCCCCACCACCACCACTACCATCACAACCACCACTATCTCTACTAGTGGTTGTGGCATATATCCCAATTCTTCTTTTGCAGCTGCAGGGTCCAGGAGTAATAATAATACTAATAATAATATAAATATAAATACTGCATCATCACTTGTTGCTTCTTCCTCTTCTCCTTTCGCATCCAATATGAGGCCTCATTTTATGCCACAAACCTCGCCCTCCACTTCTTCTGGCTTTCAAAGATTCCATGACCAACATGTACAGCAACTCCAAAAAGAAGAGCAAATTCAACTAGTTAATCAGAAACAACCATTTCAAAAACTACCAGGTCAGATCAGTGGCGGCGGCGGTAGTAATTCTGGTATGACTTTACCAAATACGCAAGCTGCTCAAGCAACCAGATCCAGAAAAAGAAAGAGTCAACACAAAAGAATGGTTTGCCATGTGACGGCGAAAAATCTCACCGCAGATTCGTGGGCCTGGAGAAAATACGGTCAAAAGCCTATTAAAGGTTCTCCATACCCAAGGAACTATTATAGATGTAGCAGTTCAAAAGGTTGTGGGGCCAGGAAGCAAGTAGAACGGAGCAATACTGAACCAGATATGTTTATCGTCACGTACACCGGAGAACACACACATTCGAGACCCACCCATCGGAACTCGCTCGCCGGAAGTACAAGGAACAAACCGTCGACGACGGCGAACCGTCAGCAACCCGCATCTCATGAATCTGGGTCACCAAGCAATACCGCAAACCGGGCATCGTCGTCTTCGCAGCTTTCTCCGACGACGCCTTTAACGGCAGTGGCGGCAGCGAACCACGAGTGCGCCGATGAACCCATGTTAAGCAATGAAGCCACTAGCCCTTTTCCTGAAGATGAGTTCGACTTCGCCTCTCATGATGACATTTTGATACCAAACATGGCGGCCATGATGGATAAGTTCTTGCTGGGATCCGGTGAGCTTCACGGCGGAATCGGACTTAGTGGCGGTGGGGGTAATAGCACAAGCGGCCATCCAGCGGACGGGTCGTATCCGAATACTGAACCCGGGTTGACTCCGAATCTACAACAATCCTCCCCTCTCAGCCGGTCTATCTTGTCGTTTGTTGAGTTCTGTTGTTGTCTCTTTGGAAATCTTCTTGATCATCGACACAAGTGA 1386 0.4791 MADDWDLSAVVRGCRSSSSTASAASSTSTTITTLPSSSSKAVSLPLTKQENDVFSFPSLIQPTTNGFQELHQLFRPFIPTTTTTITTTTISTSGCGIYPNSSFAAAGSRSNNNTNNNININTASSLVASSSSPFASNMRPHFMPQTSPSTSSGFQRFHDQHVQQLQKEEQIQLVNQKQPFQKLPGQISGGGGSNSGMTLPNTQAAQATRSRKRKSQHKRMVCHVTAKNLTADSWAWRKYGQKPIKGSPYPRNYYRCSSSKGCGARKQVERSNTEPDMFIVTYTGEHTHSRPTHRNSLAGSTRNKPSTTANRQQPASHESGSPSNTANRASSSSQLSPTTPLTAVAAANHECADEPMLSNEATSPFPEDEFDFASHDDILIPNMAAMMDKFLLGSGELHGGIGLSGGGGNSTSGHPADGSYPNTEPGLTPNLQQSSPLSRSILSFVEFCCCLFGNLLDHRHK 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2175 461 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 391 IPR044810 GO:0003700
Lele05g2175 461 Pfam WRKY DNA -binding domain 232 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g2175 461 MobiDBLite consensus disorder prediction 282 337 - -
Lele05g2175 461 MobiDBLite consensus disorder prediction 403 426 - -
Lele05g2175 461 FunFam WRKY transcription factor 22 213 284 - -
Lele05g2175 461 SUPERFAMILY WRKY DNA-binding domain 224 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g2175 461 MobiDBLite consensus disorder prediction 293 337 - -
Lele05g2175 461 Gene3D WRKY domain 213 284 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele05g2175 461 MobiDBLite consensus disorder prediction 181 209 - -
Lele05g2175 461 MobiDBLite consensus disorder prediction 130 154 - -
Lele05g2175 461 MobiDBLite consensus disorder prediction 405 426 - -
Lele05g2175 461 SMART WRKY_cls 230 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele05g2175 461 MobiDBLite consensus disorder prediction 181 219 - -
Lele05g2175 461 ProSiteProfiles WRKY domain profile. 225 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2175 Lele-ChrLele05 17981564 17983577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2175 209 361 WRKY Transcription Factor Family AT5G52830 63.399 4.46e-58 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele05g2175 WRKY 5.1e-26 CL0274