Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2152 ATGAGGCTTCTTATTATTCTCTCAGTTCTGTCTCTTCTTGTGCTCTTCTCTTCCCATGCAGGGGCTTATGATCCTTTGGATCCGAATGGAAATATAACGATCAAATGGGACGTCATGTCTTGGACCCCTGATGGTTATGTGGCAACAGTAACAATGCACAACTTCCAAATGTACCGTCACATAATGAACCCAGGATGGACCTTAGAGTGGTCATGGGCAAAGAAGGAAGTGATTTGGTCAATGGTTGGAGCTCAGACAACAGAGCAAGGTGACTGTTCCAAGTTCAAAGGCAATGTTCCTCATTGTTGCAAGAAGACTCCAACTGTGGTGGATCTCCTTCCCGGGGTACCCTACAACCAGCAATTCACTAACTGTTGTAAAGGCGGGGTCGTCCCCGCGTGGGGCCAGGACCCTGCCGGGGCCCTCTCCTCCTTCCAGGTCAGCGTAGGCCAAGGTGGCACTTCTAATAAGACTGTTAAGTTGCCTAAGAACTTCACTCTCCTTGCTCCTGGCCCTGGTTATACTTGTGGCCCTGCTAAGGTTGTTCCTTCTACTGTGTTTCTTACTCCTGATAAGCGCAGAAAGACTCAAGCACTCATGACATGGAATAACAAGAAGAACTGTGTCAAGAGTGGCTCTAAATTCCGTGGAGATAAAGGGCTTCACAGTACAAAGAAAGACAACGACCAATTGTTACAGTGTACCCATCACATGTGCCCTATCAGAGTACACTGGCACGTGAAGCTCAACTACAAAGACTATTGGCGAGTGAAGATTGCTATAACAAATTTCAATTACAAGATGAATTACACCCTTTGGACTCTTGCTGTTCAACATCCAAATCTCAACAATGTCACTCAAGTCTTCAGCTTTGATTACAAGCCTCTTGTTCCCTATGAGTCTGTCAATGATACTGCTATGTTCTATGGCATGAAGTTTTACAATGACCTGTTAATGGAAGCTGGGCCATCTGGGAACGTTCAATCTGAGGTACTTATGAGGAAGGACAAGGATACTTTTACCTTCAAGCAGGGTTGGGCTTTCCCTCATAAGGTTTACTTCAATGGTGACGAGTGCATGTTGCCACCACCTGATACTTACCCATTTCTCCCTAATTCTGCTTCTCTCAACCTCCTCACCTTCCCAATATTCTTCTCCTCTTCGCTCTTCGTCCTCTTATTTCTTTGA 1188 0.4562 MRLLIILSVLSLLVLFSSHAGAYDPLDPNGNITIKWDVMSWTPDGYVATVTMHNFQMYRHIMNPGWTLEWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVPAWGQDPAGALSSFQVSVGQGGTSNKTVKLPKNFTLLAPGPGYTCGPAKVVPSTVFLTPDKRRKTQALMTWNNKKNCVKSGSKFRGDKGLHSTKKDNDQLLQCTHHMCPIRVHWHVKLNYKDYWRVKIAITNFNYKMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESVNDTAMFYGMKFYNDLLMEAGPSGNVQSEVLMRKDKDTFTFKQGWAFPHKVYFNGDECMLPPPDTYPFLPNSASLNLLTFPIFFSSSLFVLLFL 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2152 395 Pfam COBRA-like protein 46 204 IPR006918 GO:0010215|GO:0016020
Lele05g2152 395 PANTHER PROTEIN COBRA 10 204 IPR006918 GO:0010215|GO:0016020
Lele05g2152 395 PIRSF COBRA 203 395 IPR006918 GO:0010215|GO:0016020
Lele05g2152 395 PIRSF COBRA 1 216 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2152 Lele-ChrLele05 16833817 16838135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2152 10 395 COBRA Gene Family AT3G02210 57.541 0.0 521