Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2141 ATGGTGAGATTGCATTTTTGTGAGTTTGATGAACAAATTGAAAAAGCTGGAGAGAGAGTTTTTCATATCTTCATTAATGATGCTTTGGTGGAGAGAATTGCGGATGTGATGATGTGGACTCAGAGTCAGAGAATGGCTCCTGTTCATCGGGATTATGCGGCGTCAATGATGCCGAGCGATGGAAGCTTGAAGAAGCTAAATCTTTCAATTAAGTTGCAACCAAGCCTATTTGCAAGCACTTACAGAAATGTTTTATTGGATGGTATTGAAATTTTTAAGATAAGTGACTTCAGAAACAATCTCGGAGGTTCCAATCCCGATCAACCTTCTTCTCCCTCGCTGCTTCTCTATTGCGAGGTAAAAGCAGCCACCAATAATTTCGATGATAGTTTAATTATAGGTGTTGGAGGGTTTGGTAGTGTCTATAAAGGCTACATTGACAACGGTTCAGTTCCTGTGGCAATCAAACGGCTCAAACAAGGTTCACAACAAGGGCACAAAGAGTTCCAAACTGAGATTGAAATGATGTCTCAACTTCGTCACCATCATTTAGTATCTCTCATCGGTTACTGCAACGATAACGACGAGATGATCCTTGTCTACGAGTTCATGTCTCGTGGGACCTTTCGTGAGCATCTTTACGATTCTGAAAACCAACCACTTTCTTGGAATCAGAGGCTGGAGATTTGCTTAGGTGCTGCGCGAGGACTTCATTACCTACATACAGGGGCAAAGCATGCAATCATTCATCGCGATGTCAAGTCGACTAACATTTTGATAGATCAAAACTGGATGGCCAAAATTTCGGATTTCGGACTATCCAAAATAGGACCTGCGGGTATTCCGAGATCTAACATTAACATAAGCACGTTAGTGAAAGGAAGCATTGGATATTTGGATCCAGAATACTACACATGTCAAATATTGACGGATAAGTCAGACGTGTATTCATTTGGAGTTGTCATGCTTGAGGTATTATGTGGGAGGGCTCCAATTCTCCGTGCGGTGGAGAGGGAGTGGCAAAACCTCGTAGAGTGGTTTTGA 1044 0.4215 MVRLHFCEFDEQIEKAGERVFHIFINDALVERIADVMMWTQSQRMAPVHRDYAASMMPSDGSLKKLNLSIKLQPSLFASTYRNVLLDGIEIFKISDFRNNLGGSNPDQPSSPSLLLYCEVKAATNNFDDSLIIGVGGFGSVYKGYIDNGSVPVAIKRLKQGSQQGHKEFQTEIEMMSQLRHHHLVSLIGYCNDNDEMILVYEFMSRGTFREHLYDSENQPLSWNQRLEICLGAARGLHYLHTGAKHAIIHRDVKSTNILIDQNWMAKISDFGLSKIGPAGIPRSNINISTLVKGSIGYLDPEYYTCQILTDKSDVYSFGVVMLEVLCGRAPILRAVEREWQNLVEWF 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2141 347 Pfam Protein tyrosine and serine/threonine kinase 133 338 IPR001245 GO:0004672|GO:0006468
Lele05g2141 347 PANTHER OS07G0166700 PROTEIN 119 346 IPR045272 GO:0004714|GO:0006468
Lele05g2141 347 FunFam Os07g0541700 protein 207 286 - -
Lele05g2141 347 Gene3D Transferase(Phosphotransferase) domain 1 204 347 - -
Lele05g2141 347 FunFam receptor-like protein kinase FERONIA 99 203 - -
Lele05g2141 347 Pfam Malectin-like domain 1 94 IPR024788 -
Lele05g2141 347 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Lele05g2141 347 SUPERFAMILY Protein kinase-like (PK-like) 108 335 IPR011009 -
Lele05g2141 347 SMART serkin_6 127 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2141 347 Gene3D - 1 95 - -
Lele05g2141 347 Gene3D Phosphorylase Kinase; domain 1 115 203 - -
Lele05g2141 347 ProSitePatterns Protein kinases ATP-binding region signature. 133 156 IPR017441 GO:0005524
Lele05g2141 347 ProSiteProfiles Protein kinase domain profile. 127 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2141 Lele-ChrLele05 16624686 16625910 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2141 117 346 Receptor kinase-like Gene Family AT3G51550 63.913 3.91e-101 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele05g2141 PK_Tyr_Ser-Thr 1.5e-47 CL0016