Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2126 ATGGATGAGGAGAAGAGAGAGGATAAGCAGACAGAAGAAGTACGGTACCGTGGGGTAAGGCGGCGGCCGTGGGGGAAGTTTGCGGCGGAGATAAGAGACCCGACCAAGCAAGGAGTAAGGCTGTGGCTTGGGACATTTGAGACAGCTGAAGAGGCAGCAAGAGCTTATGACCAAGCGGCTTACAACTTTAGGGGTAATCTTGCAGTTCTTAATTTTCCCCAACACTACAATCTTCCTCCGCCGCCGCCATATCAACCATTCTTTTCTTCTTCTACTACTTATTCTTCTCTTTCTTCTGGAGCTTCTGGTGACACTGCAAGTTCAGCAACTTCTGGACAACACTTTCAAAGGGAAGTTATTGAGTTTGAGTGTTTGGATGATAAGGTATTGGAAGAGCTTCTCGTATCTCAAGAGAACAAGAACAAATATGATTGA 435 0.4621 MDEEKREDKQTEEVRYRGVRRRPWGKFAAEIRDPTKQGVRLWLGTFETAEEAARAYDQAAYNFRGNLAVLNFPQHYNLPPPPPYQPFFSSSTTYSSLSSGASGDTASSATSGQHFQREVIEFECLDDKVLEELLVSQENKNKYD 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2126 144 MobiDBLite consensus disorder prediction 83 112 - -
Lele05g2126 144 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Lele05g2126 144 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Lele05g2126 144 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Lele05g2126 144 Gene3D AP2/ERF domain 14 75 IPR036955 GO:0003700|GO:0006355
Lele05g2126 144 Coils Coil 136 144 - -
Lele05g2126 144 FunFam Ethylene-responsive transcription factor 2 14 74 - -
Lele05g2126 144 MobiDBLite consensus disorder prediction 88 112 - -
Lele05g2126 144 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Lele05g2126 144 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Lele05g2126 144 PANTHER DNA-BINDING DOMAIN 5 137 IPR044808 GO:0003700|GO:0009873
Lele05g2126 144 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Lele05g2126 144 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2126 Lele-ChrLele05 16196122 16196556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2126 7 140 AP2-EREBP Transcription Factor Family AT3G23230 61.940 4.78e-45 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele05g2126 AP2 1.1e-14 CL0081