Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2113 ATGGATAGACCTTGGCTGCAGCATGTGCCTACATCGCATAAAGGTTCTGTGCAGATGCATCCTCTGTCAAAAGCCTCTGGGCTGCAGAATCTGCTAGCATCTAGTAAGAGAAAAACACAGATGGAATTCAGTAAATTGGGGACAACTTGGTCTTCAAGAGTTCGTTGGCAGGTCGAGGCAATGGCTCCGAAACAGCCGAGTACGGGTTTATTCGTTGGATTGAACAAGGGTCACGTTGTGACCAAGAAGGAATTGGCTCCACGCCCGTCAGATCGCAAAGGGAAAACCAGCAAGAGGGTACACTTTGTAAGGAGTCTTATCCGTGAAGTTGCCGGCTTTGCTCCTTATGAGAAGAGGATTACAGAGCTTTTGAAGGTTGGCAAGGATAAGAGAGCATTGAAAGTTGCCAAGAGAAGATTGGGTACCCACAAGAGAGCTAAGAAGAAGCGTGAGGAGATGTCCAACGTGCTCCGAAAGATGAGGGCTGGTGGAGCTGGTGACAAAAAGAAGTGA 513 0.4815 MDRPWLQHVPTSHKGSVQMHPLSKASGLQNLLASSKRKTQMEFSKLGTTWSSRVRWQVEAMAPKQPSTGLFVGLNKGHVVTKKELAPRPSDRKGKTSKRVHFVRSLIREVAGFAPYEKRITELLKVGKDKRALKVAKRRLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2113 170 MobiDBLite consensus disorder prediction 138 170 - -
Lele05g2113 170 FunFam 60S ribosomal protein L36 61 166 - -
Lele05g2113 170 ProSitePatterns Ribosomal protein L36e signature. 115 125 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele05g2113 170 Gene3D 60S ribosomal protein L36 59 167 IPR038097 -
Lele05g2113 170 PANTHER 60S RIBOSOMAL PROTEIN L36 26 168 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele05g2113 170 Pfam Ribosomal protein L36e 68 161 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lele05g2113 170 MobiDBLite consensus disorder prediction 1 20 - -
Lele05g2113 170 MobiDBLite consensus disorder prediction 147 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2113 Lele-ChrLele05 15958445 15964261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2113 61 170 Cytoplasmic Ribosomal Protein Gene Family AT3G53740 79.091 9.26e-57 172