Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2087 ATGGAGGGCCATCGTGATATGGGTCTTATTGGGGAAGTTGATCATAGTTTGATGGGTGGTAGGATGAGGGATCATGAGTATGAGAGTCGGACTGGGAGCGATAATTTTGAAGGAGTTTCCAGCGATGATCAGGACGCCGCCGGCAACGATCAGCCTCCGGGAAGAAGAAGAAAGAAATATCACAGACATACTCCTCGTCAAATCCAAGAGCTCGAATCATTTTTCAAGGAGTGTCCTCATCCTGATGAGAAGCAGAGGATGGAACTTAGTAAGAGGTTGGGCTTAGAGAATAAACAGATCAAGTTCTGGTTTCAAAATAGAAGAACTCAAATGAAGACTCAATTGGAACGCCACGAGAATATAATTCTAAGACAAGAGAATGAGAAACTCCGGGCCGAGAATATTATGATAAATGAAGCCATGGCCAACCCGCTGTGTAACCGATGTGGTGGCCTGGCTATTCCTGGCCAAATCTCATTTGAGGACCACCATCTTAGAATCGAAAATGCTCGACTTAAGGATGAGGTGAATCGAATATGTACCTTGGCGAACAAGTTCCTGGGTAGGCCACTATCATCATTTGCCGGCCCCACTTCTGTTATGGGTTCAAATTCTGGTCTTGAACTTGCTATAGGAAAGAGCAAAATCGGTGGCTCGAGCAATCTAGGTTCTTCCCTGCCAATGGGGCTTGACTTAGGGGAAGGTACTATGGGCGCGCATTTGGCAATGCCCCAAATTATATCGCAGTTGGGAATGATGGGAGGCGAAATTCAGGTTGATAGGTCTATGCTCATCGAACTTGCACTGTCTGCTATGGAGGAATTAATGAAGATGGCTCAGGCGTATAGCCCTCTTTGGATCAAGTGTTTGGGTGGTGAGAAAGAGATACTGGACCTTGAAGAGTATGACAGGATAATTTCTCCTTGTATCAGCCCAAAACCGGCGGGTTTTGTAACCAAGGCTACACGGGAAACCGGGATAGTCATCATAAACAGTCTAGCCCTCATGGAGACATTGATGGACGCGAACCGGTGGGTGGAGATGTTTCCCTCATTGATAGCTAGAGCTGCGACTGTCGATGTAATATCCAATGGTATGGGTGGAACCAGAAATGGTGCTTTGCAAGTGATGCATGCTGAGGTTCAATTGCTTTCGCCGCTCGTCCCCGTGCGTCAACTGAGATTTCTCCGGTTTTGCAAGCAGCATACAGAAGGCGTGTGGGCTGTAGTTGATATTTCAATTGAGATTGGGCATAGTTCGATCAATGGCCTCCCGTTCATGAGCTGTAGGAGGCTTCCTTCGGGCTGTGTTGTGCAGGATATGCCTAATGGTTACTCTAAGGTTACATGGGTTGAGCACATGCAGTACGACGAAAGTGTTGTTCACCAACTGTACCGGCCGTTGTTGAATTCTGGCTTCGGCTTTGGAGCTCATTGGTGGATTGCCACCCTTCAAAGACAATGTGAATGCTTGGCAATCCTCATGTCCTCTTCTATACCCAGTGAAGATCATACAGCCTTAAGCCAAGCTGGTAGGAGAAGCTTGTTGAAGCTGGCACAGCGTATGACAAATAACTTCTGTTCCGGGGTTTGTTTGTCGTCCGCACGCAAGTGGGACTGTCTTCACATTGGCACTCTTGGCGATGATGTGAAGGTGATGACCCGGAAGAATGTGGATGACCCGAGCGAGCCTCCTGGGATGGTGCTGAGTGCCGCGACTTCTGTTTGGGTTCCAGTGTCCCGGGAGAGTCTGTTCAATTTCGTGCGTGACGAACGGTTGAGGAGTGAGTGGGACATTTTGTCGAATGGGGGACCGATGCAGGAGATGGTCCATATTGCCAAAGGTCAAGGATCTGGTAATTGTGTCTCTCTACTTCGTGCCAGCGCTGTGAATCCCAAGGAGAGCAACATGGCAATTCTGCAAGAGACGTGGACAGACCCGTCGTGCTCGGTGGTGGTATACGCGCCGGTTGACGTGCAATCATTGAATGTTGTAATGAACGGGGGAGACTCCGCCTATGTGGCTCTCTTGCCTTCAGGTTTCGCCATTCTCCCTGACGGCCGCCAATCCAGCTTTGGCAGCGGCTGCCTACTCAAAGGTGGCAGCCCAGACGGTGACCACCAAGGAAGCCTGCTCACGGTAGGGTTCCAGATTCTGGTAAACAGTCTGCCAACGGCGAAACTCACGGTGGAGTCGGTCGAGACGGTAAACAACCTCATCTCATGCACCATTCAGAAGATCAAAAGCGCCCTCGGAGTTGCATGA 2265 0.4945 MEGHRDMGLIGEVDHSLMGGRMRDHEYESRTGSDNFEGVSSDDQDAAGNDQPPGRRRKKYHRHTPRQIQELESFFKECPHPDEKQRMELSKRLGLENKQIKFWFQNRRTQMKTQLERHENIILRQENEKLRAENIMINEAMANPLCNRCGGLAIPGQISFEDHHLRIENARLKDEVNRICTLANKFLGRPLSSFAGPTSVMGSNSGLELAIGKSKIGGSSNLGSSLPMGLDLGEGTMGAHLAMPQIISQLGMMGGEIQVDRSMLIELALSAMEELMKMAQAYSPLWIKCLGGEKEILDLEEYDRIISPCISPKPAGFVTKATRETGIVIINSLALMETLMDANRWVEMFPSLIARAATVDVISNGMGGTRNGALQVMHAEVQLLSPLVPVRQLRFLRFCKQHTEGVWAVVDISIEIGHSSINGLPFMSCRRLPSGCVVQDMPNGYSKVTWVEHMQYDESVVHQLYRPLLNSGFGFGAHWWIATLQRQCECLAILMSSSIPSEDHTALSQAGRRSLLKLAQRMTNNFCSGVCLSSARKWDCLHIGTLGDDVKVMTRKNVDDPSEPPGMVLSAATSVWVPVSRESLFNFVRDERLRSEWDILSNGGPMQEMVHIAKGQGSGNCVSLLRASAVNPKESNMAILQETWTDPSCSVVVYAPVDVQSLNVVMNGGDSAYVALLPSGFAILPDGRQSSFGSGCLLKGGSPDGDHQGSLLTVGFQILVNSLPTAKLTVESVETVNNLISCTIQKIKSALGVA 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2087 754 CDD START_ArGLABRA2_like 261 489 - -
Lele05g2087 754 SUPERFAMILY Bet v1-like 511 738 - -
Lele05g2087 754 MobiDBLite consensus disorder prediction 1 32 - -
Lele05g2087 754 MobiDBLite consensus disorder prediction 1 64 - -
Lele05g2087 754 Gene3D - 42 130 - -
Lele05g2087 754 ProSiteProfiles START domain profile. 257 493 IPR002913 GO:0008289
Lele05g2087 754 SMART START_1 266 490 IPR002913 GO:0008289
Lele05g2087 754 Pfam Homeodomain 57 112 IPR001356 GO:0003677
Lele05g2087 754 Pfam START domain 266 490 IPR002913 GO:0008289
Lele05g2087 754 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Lele05g2087 754 MobiDBLite consensus disorder prediction 33 47 - -
Lele05g2087 754 CDD homeodomain 57 114 IPR001356 GO:0003677
Lele05g2087 754 SMART HOX_1 56 118 IPR001356 GO:0003677
Lele05g2087 754 SUPERFAMILY Homeodomain-like 40 114 IPR009057 -
Lele05g2087 754 Coils Coil 108 143 - -
Lele05g2087 754 SUPERFAMILY Bet v1-like 259 490 - -
Lele05g2087 754 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 55 751 IPR042160 -
Lele05g2087 754 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Lele05g2087 754 FunFam Homeobox-leucine zipper protein HDG1 41 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2087 Lele-ChrLele05 15459484 15464590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2087 23 751 Homeobox Transcription Factor Family AT3G61150 58.289 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele05g2087 START 4.2e-45 CL0209