Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2081 ATGGGATTTCTCCGGCGACTCTTCGGCGCCAAAAAATCGGATCATTCCTCCGCTTCCTCCGGCAAGGACAAGAAGAAATGGAGCTTCGGCAAAAGCAATAAGGACAATACTCACGGTTCTAAAACCAAAGGATCTGTTCTCAACCACTTTGATTCCTCCACCGCATTCTCTGACTCTCTAGATGCCAATAAGCATGCCATCGCTGTAGCGGCGGCCACGGCGGCCGTTGCAGAGGCTGCACTGGCCGCTGCCCATGCGGCTGCAGAGGTAGTCCGACTAACCAGTGGCGGTAGCGGCACCGTCACTCGACCGGTGAGTACGACACAGGCCAGCACTAGCCAAGGCCGGTGGGTGGAGGAAGCGGCCACCGTTAAAATACAGTCCGCTTTCCGGTCTTATCTGGCAAGGAGAGCACTACGAGCACTCAAAGCATTGGTGAAGCTGCAAGCACTGGTGAGAGGCCATATAGTGAGAAAGCAAACTGCAGACATGCTCAGGCGCATGCAAACATTGGTCAGACTGCAGGCTCGGGCACGTGCAAGTCGCGCGCACATGTCTGATTATCTGCATTCTAGCAAGTCTTCTCTGTATTATCACCCTGTCCCTGAAGATCATGAGCATCCACTTCGTGCTTATAGTACTAAATTTGATGGATCTTCCATCCTGAAGAGATGTAGCTCCAATGCAAATTTTAGGGAGATTGGCCCACAAAGAGCACAGTTCGGATCACATTGGTTGGATCGTTGGATGGAAGAAAGCGTTTGGAGCCACCCCAGAGACGGTTCACTGAGAAATGCACGCGCCGACGATGAAAAGAGTGACAAGATCCTTGAAGTGGACACGTGGAAGCCACAATTCAGGACACACCGAAGTAGCAGCTCCTTCCACGCATCTCAATACTACTTAACTCCCGCCCTCATCAACAACAGTGAGATGGCATATGACTCTCCTTCAAAAATCTCGGCGAAAGGTCTAAACCAAAGCCTATCATCACTGACCACCTTGAAAATTCGGAAAGGAAAAGAAGTATCATCAGCTTCAAGAACTGCTGAGAATAGCCCACAAGCACTTTCAGCTTCATCAAGACCTGGAAGTTGTGGAGGAGGTAGGAGAAACCCTTTCACACCGACAAGGAGTGAGTGTTCTTGGGGTTACTTTGGGTATCCAAATTACATGGCCAACACTGAATCATCAAGAGCTAAGGTTAGATCTCAGAGTGCTCCTAAACAAAGGTTGGAGTTTGATAGATATAGTTCAAGTGGGAGAAGTGTTCAAGGCTGCTGGGATTCTTCAGATAGGGATGGAGATTTCAGGAACAGAGCCTATCCAGCTTCAACAACACGCTTGAACGGTGTTGGGAGTACCAATTTAAGGTGA 1377 0.496 MGFLRRLFGAKKSDHSSASSGKDKKKWSFGKSNKDNTHGSKTKGSVLNHFDSSTAFSDSLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGSGTVTRPVSTTQASTSQGRWVEEAATVKIQSAFRSYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQARARASRAHMSDYLHSSKSSLYYHPVPEDHEHPLRAYSTKFDGSSILKRCSSNANFREIGPQRAQFGSHWLDRWMEESVWSHPRDGSLRNARADDEKSDKILEVDTWKPQFRTHRSSSSFHASQYYLTPALINNSEMAYDSPSKISAKGLNQSLSSLTTLKIRKGKEVSSASRTAENSPQALSASSRPGSCGGGRRNPFTPTRSECSWGYFGYPNYMANTESSRAKVRSQSAPKQRLEFDRYSSSGRSVQGCWDSSDRDGDFRNRAYPASTTRLNGVGSTNLR 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2081 458 MobiDBLite consensus disorder prediction 8 44 - -
Lele05g2081 458 SMART iq_5 118 140 IPR000048 GO:0005515
Lele05g2081 458 SMART iq_5 141 162 IPR000048 GO:0005515
Lele05g2081 458 Pfam Protein of unknown function (DUF4005) 343 412 IPR025064 -
Lele05g2081 458 MobiDBLite consensus disorder prediction 399 458 - -
Lele05g2081 458 Gene3D - 119 170 - -
Lele05g2081 458 MobiDBLite consensus disorder prediction 340 362 - -
Lele05g2081 458 MobiDBLite consensus disorder prediction 399 427 - -
Lele05g2081 458 Pfam IQ calmodulin-binding motif 143 160 IPR000048 GO:0005515
Lele05g2081 458 Pfam IQ calmodulin-binding motif 121 140 IPR000048 GO:0005515
Lele05g2081 458 MobiDBLite consensus disorder prediction 8 38 - -
Lele05g2081 458 ProSiteProfiles IQ motif profile. 119 147 IPR000048 GO:0005515
Lele05g2081 458 MobiDBLite consensus disorder prediction 340 373 - -
Lele05g2081 458 ProSiteProfiles IQ motif profile. 143 170 IPR000048 GO:0005515
Lele05g2081 458 MobiDBLite consensus disorder prediction 443 458 - -
Lele05g2081 458 PANTHER IQ-DOMAIN 5-RELATED 13 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2081 Lele-ChrLele05 15361204 15365202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2081 1 428 IQD Protein Family AT5G07240 45.291 1.68e-65 215