Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2071 ATGGGCTCTTCAGTTCTCTACTCTCCTTGTCCCCCTCGCTTCTACTCTCTCACACCAACACTTTCTCTCTCTTCTCTCTCTTCTCTCTCTTCCGTTCTTCTCCAACTACCCCATCTTCCGTCTTCTTCCCTCTCCCAGCGAAGAAGAACTCTGTCAAAGACAATTACAACCCCACTTGCCTATGTGACCGGACCCGCATCCGATCCCATTTTCAGTGAGAGCGACCCTAGGATAGATGGGTCGGATCCCCGGCCGGAGAAAGTCCAGCCACCCACCGTTATTAGCTGGGGGCTTCTTTGGATGCTTTTGATGAAACACAAACTGCGGCTTGTGGTTTCAGTTGTGACTCTAATTTGTTGCACAACTTGTACTCTTTCTATGCCCCTATTTTCTGGTCAATTTTTCGAGGTTCTAATTGGGGCAAGGCCAGAACCATTATGGAGGCTCCTTAGTAAGGTTGGAATGCTGTATGCTCTTGAGCCGCTTTTAACTATTACTTTTGTTACAAACGTGAACATAATGTGGGAGAAGATTATGTCAACACTAAGAGCTCAGATCTTTGGAAGGATATTGATGCAAAAGGTGGAATTTTTTGACAAATACAAGGTTGGTGAACTCACCGGTTTGCTGACATCCGATTTGAGTTCTCTTAAAGATATTGTGAGTGAAAATGTTGCAAGGGATCGTGGGTTCAGGGCATTATCTGAGGTCATTGGGACAATATGCATACTTTTTGCTTTATCGCCTGAACTTGCTCCAATTTTGGGTATCCTAATGCTCACGGTTTCTGTTTCAGTTGCTATCTACAAGAGATCAACTCTGCCGGTTTTTAAAGCTCATGGGTTGGTTCAAGCATCAATATCTGACTGTGTAGCTGAAACATTTTCTGCTATCCGTACAGTAAGATCCTTTGGTGGAGAGAAACGCCAAATGTTTACATTTGCTAACCAGGTTCTTTCTTTCCAATCAAGCGGGATAAAGCTTGCCACTTTTAAATCTCTAAATGAGTCCATGACTAGAGTTGCTGTTTATGTTTCTCTGCTGGCATTATATATCCTTGGAGGAAACAAAGTTAAAGCGGGTGAACTCTCTGTTGGAACTGTGGCGTCTTTTATTGGATACACTTTCACATTAACTTTTGCTGTTCAAGGAATGGTTAATACTTTTGGAGATCTACGTGGAGCTATTGCTGCTGTTGAGAGGATCAACAATGTTTTCTCTGAGGTTCAAATTGATGAGGCCCTTGCTTATGGCTTAGAAAGAGAACTGAAACAGAAAGAATTAAATGATGATAACTATAAACTGTTCTTCTCTGATAATTCTACTGAGAAAAACCAACAAAAATACTTGCATTACATGTCAGCGTTGAAATCATCAAGAAATTTGTACAGCTTAGCTTGGTCTGGAGATGTTTGTCTTGAAGATGTGTATTTCTCTTATCCTTTAAGGCCAGATGTGGAAATATTAAGGGGCTTAAATTTAACACTAAAATTTGGAACTATAACTGCATTGGTGGGTTCTAGTGGTGCGGGAAAAAGTACAATAGTACAGCTATTGGCTCGGTTTTATGAGCCAACAAGAGGTCATATAACAGTTGCTGGAGAGGATGTTCGAACATTTGACAAGAGCGAATGGGCTCAGGCCGTCTCTATTGTAAATCAAGAGCCTGTTCTGTTTTCTGTGTCCGTTGGAGAAAATATTGCATATGGGCTTCCAGATGATAATGTTTCTAGAGAAGATATCATCAAGGCAGCAAAAGCTGCAAATGCTCATGACTTCATACTTTCACTTCCACAGGGTTATGATACACTTGTCGGTGAGCGTGGAGGTCTATTAAGTGGGGGACAGAGGCAGAGAATTGCTATTGCACGTGCACTCTTAAAGAATGCCCCAATCCTTATACTTGATGAGGCCACCAGTGCCTTAGATGCAGTTAGTGAGAGGTTGGTGCAGGATGCTCTCAACCATTTGATGAAGGGGAGGACAACATTAGTGATAGCTCACCGATTGAGCACAGTTCAAAATGCCCATCAAATTGCACTCTGCTCTGAAGGCAAAGTTGCAGAACTAGGAACACACTTTGAGTTGTTGGCTAAGAAGGGCCAATATGCTTCACTGGTTGGTACTCAAAGGCTTGCATTTGAATGA 2148 0.4232 MGSSVLYSPCPPRFYSLTPTLSLSSLSSLSSVLLQLPHLPSSSLSQRRRTLSKTITTPLAYVTGPASDPIFSESDPRIDGSDPRPEKVQPPTVISWGLLWMLLMKHKLRLVVSVVTLICCTTCTLSMPLFSGQFFEVLIGARPEPLWRLLSKVGMLYALEPLLTITFVTNVNIMWEKIMSTLRAQIFGRILMQKVEFFDKYKVGELTGLLTSDLSSLKDIVSENVARDRGFRALSEVIGTICILFALSPELAPILGILMLTVSVSVAIYKRSTLPVFKAHGLVQASISDCVAETFSAIRTVRSFGGEKRQMFTFANQVLSFQSSGIKLATFKSLNESMTRVAVYVSLLALYILGGNKVKAGELSVGTVASFIGYTFTLTFAVQGMVNTFGDLRGAIAAVERINNVFSEVQIDEALAYGLERELKQKELNDDNYKLFFSDNSTEKNQQKYLHYMSALKSSRNLYSLAWSGDVCLEDVYFSYPLRPDVEILRGLNLTLKFGTITALVGSSGAGKSTIVQLLARFYEPTRGHITVAGEDVRTFDKSEWAQAVSIVNQEPVLFSVSVGENIAYGLPDDNVSREDIIKAAKAANAHDFILSLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDAVSERLVQDALNHLMKGRTTLVIAHRLSTVQNAHQIALCSEGKVAELGTHFELLAKKGQYASLVGTQRLAFE 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2071 715 Gene3D ABC transporter type 1, transmembrane domain 84 410 IPR036640 GO:0005524|GO:0016020
Lele05g2071 715 MobiDBLite consensus disorder prediction 66 86 - -
Lele05g2071 715 ProSitePatterns ABC transporters family signature. 612 626 IPR017871 GO:0005524|GO:0016887
Lele05g2071 715 SUPERFAMILY ABC transporter transmembrane region 99 408 IPR036640 GO:0005524|GO:0016020
Lele05g2071 715 Pfam ABC transporter transmembrane region 111 381 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele05g2071 715 CDD ABC_6TM_TAP_ABCB8_10_like 115 402 - -
Lele05g2071 715 FunFam ATP-binding cassette sub-family B member 8, mitochondrial 469 713 - -
Lele05g2071 715 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 86 713 - -
Lele05g2071 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 462 710 IPR027417 -
Lele05g2071 715 Pfam ABC transporter 489 640 IPR003439 GO:0005524
Lele05g2071 715 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 111 394 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele05g2071 715 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 471 709 IPR003439 GO:0005524
Lele05g2071 715 SMART AAA_5 498 692 IPR003593 -
Lele05g2071 715 Gene3D - 469 712 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2071 Lele-ChrLele05 15175136 15181399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2071 468 715 Calmodulin-binding Proteins AT2G36910 54.000 1.02e-74 261