Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2057 ATGAAGAAAGCCTACGAGCTATCGGTGCTATGTGACGCCCAAGTAGCTGTCATAGTCTTTTCACAAAAAGGCAAACTCTATGAATTCTTCAGTTCTGAAAACATTATTGACCGATATGATAACCATGGCAAAAATGTTCATGCCGATACGTTTGAAGAGGAACGACTTATCCAGAGCCTGAATTCTAACTGTGAAAGCTTGGCAAGGAAGATGGAGCTTCTCGAACTTTCACAAAGGAAGCTATTGGAGCATAATGGCTTGAGTTATTGTTCTTATGAAGAACTTCAAGCAATTGAGGATCAGCTCCAATGTAGTTTACAAAACGTCAGAATGAGAAAGGCTCAGCTTTCTGGGGAGCAACTTGAGCACCTGAAAAATGAGTTTGGGGAAAATGCATGCCAGCAATGGGTTATACACAAAGAAGAAGAACATCAAAGTTCAAGTAAAAACAGCCAAAGTTCATTCGTTGAAACTGATTTACATATTGGGCTGCCAGAGAATCGTTTTTGA 510 0.4 MKKAYELSVLCDAQVAVIVFSQKGKLYEFFSSENIIDRYDNHGKNVHADTFEEERLIQSLNSNCESLARKMELLELSQRKLLEHNGLSYCSYEELQAIEDQLQCSLQNVRMRKAQLSGEQLEHLKNEFGENACQQWVIHKEEEHQSSSKNSQSSFVETDLHIGLPENRF 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2057 169 SMART madsneu2 1 32 IPR002100 GO:0003677|GO:0046983
Lele05g2057 169 Gene3D - 1 67 IPR036879 GO:0003677|GO:0046983
Lele05g2057 169 ProSiteProfiles K-box domain profile. 57 159 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele05g2057 169 ProSiteProfiles MADS-box domain profile. 1 33 IPR002100 GO:0003677|GO:0046983
Lele05g2057 169 PANTHER SERUM RESPONSE FACTOR HOMOLOG 1 150 - -
Lele05g2057 169 SUPERFAMILY SRF-like 1 44 IPR036879 GO:0003677|GO:0046983
Lele05g2057 169 Coils Coil 57 77 - -
Lele05g2057 169 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 1 29 IPR002100 GO:0003677|GO:0046983
Lele05g2057 169 Pfam K-box region 57 127 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2057 Lele-ChrLele05 14956502 14964591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2057 1 125 MADS-box Gene Family AT2G45660 50.781 1.27e-31 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-MIKC Lele05g2057 K-box 2.6e-12 No_clan