Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2042 ATGACTGCGAAGGAAGAGATGGAATTTGCAGTTGAAGTAGAAGTACTTGGAAGGGTGAGGCATAAGAACCTATTAGGTCTAAGAGGATTCTATGCAGGAGGAGAAGAAAGACTCATTGTTTACGATTACATGGCCAATAATAGCTTGCTCATTCATCTTCATGGCCAGCTCGCTCGAAGTTGTCAGCTTGATTGGCCTAAAAGAATAAGCATCTCCATTGGAGCAGCTGAAGGCTTAGCGGTGAAAGGAACTTTTTTGGCGCCAGAATACGCCATGTGGGGGAAGGTTCCAGGGAGCTGTGATGTCTATAGTTTTGGGATTTTACTTTTGAAGATCGTATGTGCGAAGAAACCGATAGAGAAGCTACCAGGAGGAGTGAAAAGGGACATAGTTAAGTGGGTGACACCATATGTTCAAAAGGGAATATTCAATCATATTGCGGATCCAAAGTTGAAGGGCAAGTTTGACAAGGAACAGTTGAAATCTGTGGTGATGTTGGCCATGAAGTGCACCGATAGTAGCCCGGAGAAGCGGCCGAGTATGGCGGAGGTGGTGGAGTGGCTCAAGGGCGGTGGCGGCAGTGTTGTTGGGCGGAGGCGAAAAGAGATTCCGGCAGCTTTGAGGGATGAAGAACACAACAAGAATGACAAGGACTATTAA 660 0.4652 MTAKEEMEFAVEVEVLGRVRHKNLLGLRGFYAGGEERLIVYDYMANNSLLIHLHGQLARSCQLDWPKRISISIGAAEGLAVKGTFLAPEYAMWGKVPGSCDVYSFGILLLKIVCAKKPIEKLPGGVKRDIVKWVTPYVQKGIFNHIADPKLKGKFDKEQLKSVVMLAMKCTDSSPEKRPSMAEVVEWLKGGGGSVVGRRRKEIPAALRDEEHNKNDKDY 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2042 219 MobiDBLite consensus disorder prediction 199 219 - -
Lele05g2042 219 PANTHER OS01G0253100 PROTEIN 3 80 IPR045271 -
Lele05g2042 219 Pfam Protein tyrosine and serine/threonine kinase 3 79 IPR001245 GO:0004672|GO:0006468
Lele05g2042 219 Pfam Protein tyrosine and serine/threonine kinase 84 187 IPR001245 GO:0004672|GO:0006468
Lele05g2042 219 ProSiteProfiles Protein kinase domain profile. 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2042 219 MobiDBLite consensus disorder prediction 201 219 - -
Lele05g2042 219 SUPERFAMILY Protein kinase-like (PK-like) 5 191 IPR011009 -
Lele05g2042 219 Gene3D Transferase(Phosphotransferase) domain 1 81 194 - -
Lele05g2042 219 Gene3D Transferase(Phosphotransferase) domain 1 2 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2042 Lele-ChrLele05 14636259 14637684 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2042 6 189 Receptor kinase-like Gene Family AT4G02010 30.544 3.89e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lele05g2042 PK_Tyr_Ser-Thr 5.6e-07 CL0016