Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2041 ATGCTTTCTCGGAAATTCTCCGTCTCGCCGTCGTACCCGGTTGTTTCTGATGTATACCCACCTGCTCTTTCTCCGAATCAGCCACATCCCTCTTACAAGTGCCACAAAATCCTCCATCTTTTGCCTCCGCTTGTCACTTCCGCCGCCTCTGTATGTTCCTTCTTCCTTCTCTTTTTCCTCTGTTTTCGCAGACTCGCGAGAAAACGCACTACCCCTTCTTCTGATTCTGAGTCTAAGCCTCCTTTTTGTTTCTCGTATTCCGTCCTCCGCCGTGCCACATCATCCTTCTCCACCCGCCTTGGCCAAGGCGGCTTCGGTCCCGTCTACTCCGGCACTCTGCCTTCGACTCGACAACCCGTCGCCGTCAAGCTAATGGACGCTGACTCTCTCCAAGGTGAGCGCGAGTTTCACAACGAGCTCTTCTTCGCCTCCAGGCTTCACTCTCAGCACGTGGTCTCCGCCATCGGCTTTTGCTCCAACAGAAATCGTCGGGGGTTTTTGCTTGTCTATGAGTTGATGGATAATGGGAACCTCCAAGACGCGCTCTTGCACCGCAAGTGCCCTGAGCTGTTGGATTGGAAGAAGCGGTTTTCCGTCATCATCGACATAGCCAAAGGGATTCAGTATCTTCACTCTTGCGACCCTCCCGTGATTCACGGTGACATCAAGCCCAGTAATATTCTATTAGACCGTTCTCTATCAGCGAAAATTGGGGATTTCGGGCTTGCACGGTTGAAATCGGAGCCCCAGATTGAAATTGGGATTTTGGACTTAGACGGTAATGAAAAGAAGAACGGTGGATTGGAGTTGGAAGAAGAGAAGGGAAAAGAAGAAGAATTAGATAGTAATGGCGGGTCATTGCTTGAAGAAACACACAGCGTGAATACCGTTGACGAAGGTAGCTTAGCTGCGGAGCAATCTCCTGAGGGTTTTGTCACGATACCCATATTGGAGCCATCCCCAGAGTCGGTGGAGGCGGCGACGGCGACGGTAGCGTCACCTTCGGAGGTGAATTTTGACGATGTTAGCTTTCAGAGTGAGAAAAACATTTCCTTGAGTTCTAAGAAAAATGGGAACGTCTTAAAGAGCAATTCCATGAAGGGTTGGTGGTGGAAACAAGACATGGAAGAAGCAGCAGAATCCCCCATGGGTGATAACAAGAAAGTGAAGGATTATGTAATGGAGTGGCTCGGAAAAGAAATAAGCAAAGAAAGATCCAAAAACGAATGGGTTGCAGCTACCTCTAATAGTGGAGGAACAATGGATAAAACAGAGAAAAAGAAGAGTAAGAGGCGCTTGGAATGGTGGAGATCAATGGACGAGGAAACCATTAATCCTAAAGCTGTGAAGAAGAAGGAGAAGAGAAGACCAGCGAGAGAATGGTGGAAAGAGGAGTACTGTGAAGAGCTTGCGAAGAAGAAGAAAAAGAAGAAACAGCAGCAAAAGAGAAATGGAATAAACAGTGACGATGATTATTGGTGGGTAAGAGACGCAGAAGACATGTATGGCGAAAGAAAAAAGGCTAAAACCCGTAAAAACAGTCATGGCAATATAGATTCGTGGTTAAATGGATTCAGTGGTGAATTATTCAGAGCTCGAAGAAACAGCCATGATTCTGCAGCAAGCTGGGAAATTCCCAAGAGTGGTGGAGTTAGTAGTACACCAAGCGTTAGAGGAACAGTTTGTTATGTTGCTCCTGAATATGGTTTTGGTGAAGATTTATCACAGAAGTGTGATGTATATAGTTTTGGGGTTCTATTACTCGTTATAGTTTCTGGGCGACGCCCACTTCAAGTGACTGGTTCACCATTATCAGAGTTCCATAGAGCAAATCTACTGTCATGGGCACGCCATTGTGCTCGCAATGGCAAGCTGCTCGATCTGGTTGATCAGTCTATTAAGTCATTAGACAAAGATGAAGCTCTTCTCTGCATCACAATTGCTCTTCTCTGTCTGCTCAAAACACCTTCTCGTCGTCCTTCAATGAAAGAGGTCGTGGGAATGCTTAGTGGTGAACTTGAACCACCACAATTGCCAGTTGAGTATTCACCTTCAACGCCATCTCGCTTCCCAGCCAAGGCTAGCAAAAAGGGTCCCTGA 2100 0.47 MLSRKFSVSPSYPVVSDVYPPALSPNQPHPSYKCHKILHLLPPLVTSAASVCSFFLLFFLCFRRLARKRTTPSSDSESKPPFCFSYSVLRRATSSFSTRLGQGGFGPVYSGTLPSTRQPVAVKLMDADSLQGEREFHNELFFASRLHSQHVVSAIGFCSNRNRRGFLLVYELMDNGNLQDALLHRKCPELLDWKKRFSVIIDIAKGIQYLHSCDPPVIHGDIKPSNILLDRSLSAKIGDFGLARLKSEPQIEIGILDLDGNEKKNGGLELEEEKGKEEELDSNGGSLLEETHSVNTVDEGSLAAEQSPEGFVTIPILEPSPESVEAATATVASPSEVNFDDVSFQSEKNISLSSKKNGNVLKSNSMKGWWWKQDMEEAAESPMGDNKKVKDYVMEWLGKEISKERSKNEWVAATSNSGGTMDKTEKKKSKRRLEWWRSMDEETINPKAVKKKEKRRPAREWWKEEYCEELAKKKKKKKQQQKRNGINSDDDYWWVRDAEDMYGERKKAKTRKNSHGNIDSWLNGFSGELFRARRNSHDSAASWEIPKSGGVSSTPSVRGTVCYVAPEYGFGEDLSQKCDVYSFGVLLLVIVSGRRPLQVTGSPLSEFHRANLLSWARHCARNGKLLDLVDQSIKSLDKDEALLCITIALLCLLKTPSRRPSMKEVVGMLSGELEPPQLPVEYSPSTPSRFPAKASKKGP 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2041 699 MobiDBLite consensus disorder prediction 408 429 - -
Lele05g2041 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lele05g2041 699 PANTHER OS07G0586332 PROTEIN 27 697 IPR044576 -
Lele05g2041 699 SUPERFAMILY Protein kinase-like (PK-like) 71 688 IPR011009 -
Lele05g2041 699 Pfam Protein tyrosine and serine/threonine kinase 96 246 IPR001245 GO:0004672|GO:0006468
Lele05g2041 699 Pfam Protein tyrosine and serine/threonine kinase 556 667 IPR001245 GO:0004672|GO:0006468
Lele05g2041 699 Coils Coil 463 483 - -
Lele05g2041 699 MobiDBLite consensus disorder prediction 674 699 - -
Lele05g2041 699 Gene3D Phosphorylase Kinase; domain 1 83 172 - -
Lele05g2041 699 SMART serkin_6 94 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2041 699 ProSiteProfiles Protein kinase domain profile. 94 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g2041 699 MobiDBLite consensus disorder prediction 264 284 - -
Lele05g2041 699 FunFam Os07g0541700 protein 173 253 - -
Lele05g2041 699 Gene3D Transferase(Phosphotransferase) domain 1 532 676 - -
Lele05g2041 699 Gene3D Transferase(Phosphotransferase) domain 1 173 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2041 Lele-ChrLele05 14613241 14615340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2041 547 666 Receptor kinase-like Gene Family AT3G58690 36.800 8.28e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Lele05g2041 PK_Tyr_Ser-Thr 2e-29 CL0016