Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g2004 ATGGAGTGTAATAAGGATGAGGCCACAAGAGCTAAAGAAATCGCTGAGAGGAAGTTTATTGCAAAGGATATTTTGGGGGCGAAGAAGTTTGCTTTAAAGGCCCAAAGACTGTTTCCTGAGCTTGAGGATATTTCTCAAATGCTGGCTACACTTGATATCTATATTTCTGCAGACAATAAAATAAATGGCGCAGCAGATTGGTATGGTATACTTGGTGCAGATCCTCAAGCTGATGATGAAACAATCCGGAAACAGTATAGGAAGCTGGCTCTCACGCTTCACCCTGATAAGAACAAGTCTATTGGAGCTGATGGGGCATTTAAACTAATTTCGGAGGCATGGAGTTTGCTTTCAGATAAGGCTAAAAAGGTAGCATATGATCAGAAGAGAAACACAAAAGCGCAGAAGGTCTTGACAAAGTCTACTGGTGCATCAGCACATCCAGGGACTAATGGGACTTACAATTTTACAAAAACTGCCACCTCAAGTGCCAGAGCTCATAAACAAACTACTAAACCAGATTCAACTTCTACTCACAAGTCAAAATCAAATACTTTCTGGACTGTCTGTAATCGATGCAAAATGCAGTATGAGTATCTTAGAGTTTATCTTAATTTGCAACTCCTGTGTCCCAACTGTCATGGCGCATTTTTGGCTGTAGAAACAGCTCCTCCACCTGCAAGCACCTCATTTAACTTTTCCCGGCAGAAGCACAATTTCAATAACCAATTGCCTAGTAAAAACAAATCTAATGCAGGAAAGAACAAGGCGACCTCAAATGTTGGAGCAGGTTATGGTAATACTGACTCCTATAACCATGCTGATTTCCAGTGGGCTCCATTTTCAAAAACTTCTGGTGTTTCAACAGCAGCTCAAGCTGCAAGTGTGGTTCAACAGGCATGTGAGAAAGTGAAGCGAGAGCGTAAGGAGGCACAAGCAGCTACAAAAAGGGAGCAGGCCCTACAAAGGAAGCAGCATGCTTCTAAAAAAGGTTATATGAATCCTACAAAGAGAAGAAGAGGCGTGGAGTATTCTGGTGTGAGCAGCCATGGTAAGGAGCCTTCAAATCAAGCAGGAATGAGAAATGGAGGAGTAGGAGCAGGCAGCTCATGTGGTTCTAAACCTGGTAATTCTGATCTCATCTCAATTAATGGTAGCTTGAAGACCAGTGGTGCAGGAGCTTCCCAGCTTGAGCTTAATAATCTTCTTATGGTGAGAGCTAGAAAAGAAATTGACAAGAAACTGAAGGATATTCAGTCGAATACTATTTCCAAGAGAGCAGTGACAGAGAATGAAAATGGGCATGAGAAAGAAAATAAGAAAGGAAAAAATAATATATCTAGTTCAGAGAGATGTGATCAAAACAACCTCTGTAAGTCTGACAATAGGAATAATAAATTCCCTGCCATCAAGAATTCTGCTGGAACTACTATTGCTAATGTAGACATGAAAACAATGACAGTTGATATCCCTGATCCTGATTTTCATGATTTTGATAAAGATCAAACTGAGAGGTCTTTTGGTGAAAATCAAGTATGGGTTGCATATGATGATGATGATGGGATGCCTCGAATTTATGCTATGATTCACAGTGTGATTTCTTTGAGTCCATTAAAGATGCGGATCAGTTGGCTCAACTCAAAGACGAACGATGAACTGGCCCCTCTAAATTGGATCATATCAGGCTTCTCTAAAACTTGCGGGGAGTTTAGAATGGGTAAATATGAAATCAATAGCTCAGTTAATTCTTTTTCTCATAAGGTTAGATGGAGAAAAGGTGCTCATGAAGCCATTTGTATTTATCCCATGAAAGGGGATGCTTGGGCTCTTTATAGGAATTGGTCACCTGATTGGAATGAGCTGACAGCAGATGAAGTGATACACAAGTATGATATGGTTGAGGTACTTGAGGATTTTAGCGCAGAATATGGTGTTATGGTCATTCCCCTGGTAAAAGTGGCTGGTTTCAAGACATTATTTCACCCGCACTTGGACCCAAGAGAAATTTGGACCATTCCAAGAGAAGAGATGTTTCGGTTTTCTCATCAGGTTCCATCATACTTACACAGAGGTAAAGAAACACCAGACGTCGTAAGGGGTTGCTGTGAGTTGGACCCAGCAGCTACTCCATCTGAACTACTTGAGGTTATAAAAGCTGTAGGAGAGGAAGACGTGGTAGGCGAGGAGGATAGTCCTGTAGAAGAAACAGCAAATGGTGACATTAAAAGACCTAATGATGAGGAAATGACGGTTGATACAGGAAAAGTTGGGAACGAGAAGGAGAAAAATGAGAAAGATATTCAGGAGATTGAAACTTTGGAAAAGGACAAATAG 2334 0.4096 MECNKDEATRAKEIAERKFIAKDILGAKKFALKAQRLFPELEDISQMLATLDIYISADNKINGAADWYGILGADPQADDETIRKQYRKLALTLHPDKNKSIGADGAFKLISEAWSLLSDKAKKVAYDQKRNTKAQKVLTKSTGASAHPGTNGTYNFTKTATSSARAHKQTTKPDSTSTHKSKSNTFWTVCNRCKMQYEYLRVYLNLQLLCPNCHGAFLAVETAPPPASTSFNFSRQKHNFNNQLPSKNKSNAGKNKATSNVGAGYGNTDSYNHADFQWAPFSKTSGVSTAAQAASVVQQACEKVKRERKEAQAATKREQALQRKQHASKKGYMNPTKRRRGVEYSGVSSHGKEPSNQAGMRNGGVGAGSSCGSKPGNSDLISINGSLKTSGAGASQLELNNLLMVRARKEIDKKLKDIQSNTISKRAVTENENGHEKENKKGKNNISSSERCDQNNLCKSDNRNNKFPAIKNSAGTTIANVDMKTMTVDIPDPDFHDFDKDQTERSFGENQVWVAYDDDDGMPRIYAMIHSVISLSPLKMRISWLNSKTNDELAPLNWIISGFSKTCGEFRMGKYEINSSVNSFSHKVRWRKGAHEAICIYPMKGDAWALYRNWSPDWNELTADEVIHKYDMVEVLEDFSAEYGVMVIPLVKVAGFKTLFHPHLDPREIWTIPREEMFRFSHQVPSYLHRGKETPDVVRGCCELDPAATPSELLEVIKAVGEEDVVGEEDSPVEETANGDIKRPNDEEMTVDTGKVGNEKEKNEKDIQEIETLEKDK 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g2004 777 MobiDBLite consensus disorder prediction 429 447 - -
Lele05g2004 777 Pfam DnaJ domain 66 127 IPR001623 -
Lele05g2004 777 MobiDBLite consensus disorder prediction 308 333 - -
Lele05g2004 777 MobiDBLite consensus disorder prediction 426 457 - -
Lele05g2004 777 PANTHER BNAC03G44070D PROTEIN 1 710 - -
Lele05g2004 777 SUPERFAMILY Chaperone J-domain 64 133 IPR036869 -
Lele05g2004 777 SMART dnaj_3 65 122 IPR001623 -
Lele05g2004 777 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele05g2004 777 MobiDBLite consensus disorder prediction 240 261 - -
Lele05g2004 777 MobiDBLite consensus disorder prediction 735 777 - -
Lele05g2004 777 MobiDBLite consensus disorder prediction 308 325 - -
Lele05g2004 777 MobiDBLite consensus disorder prediction 160 181 - -
Lele05g2004 777 Gene3D DnaJ domain 55 146 IPR036869 -
Lele05g2004 777 CDD DnaJ 66 119 IPR001623 -
Lele05g2004 777 Coils Coil 294 324 - -
Lele05g2004 777 MobiDBLite consensus disorder prediction 345 372 - -
Lele05g2004 777 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lele05g2004 777 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele05g2004 777 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele05g2004 777 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele05g2004 777 Coils Coil 756 776 - -
Lele05g2004 777 Pfam Domain of unknown function (DUF3444) 486 692 IPR024593 -
Lele05g2004 777 MobiDBLite consensus disorder prediction 725 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g2004 Lele-ChrLele05 14289218 14291551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g2004 4 225 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.348 8.21e-31 122