Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1999 ATGAAGCGAAGATGGGGGAGAAGTCGAAATAGTGACTCCACCAGGGGCAATGCCAACATGCCTGCCATGAAGAAGAATTCTGAGCAGACTCGATTAGGATTTGTATTCAGCAAGTTGGCGAATGAGATAGGAGATCCTGTTGATTTTGAACTTCCAGAATGGTTTAATAAGTGGAAGACAGTGTCATATGTCTCTATAAAGCGCAGTATCCTTTATATATATGTTACAAAGAAGGTAAAGAGAAGGCTTGATGATGATGGCATATTCTGTTCCTGTACTCCTTCCCCTGGGTCTTCTAATGTTTGTGGTAAATATTGCCACTGTGGGATGCTTATGTCTAGCTGCTCTTCAGGCTGTAAATGTGGGAGTTCTTGTCTCAATAAACCATTTCAGCATCGACCTACAAAAAAGATGAAATTAGTTCAGACTGAGAAATGTGGTTCTGGAATTGTGGCGGATGAAGATATCAAGCAAGGGGACTTTGTCATTGAATATGTTGGAGAAGTCATTGATGACAAAACATGTGAAGAAAGGCTTTGGAATATGAAACATCGTGGGGAGACAAACTTCTACTTATGTGAAATTAACAGAGATATGGTGATTGATGCAACATACAAGGGGAACAAATCAAGATATATAAATCATAGTTGCTGCCCCAATACGGAGATGCAGAAATGGATAATTGATGGTGAAACAAGAATTGGCATATTTGCAACACGTGACATAAGGAAGGGCGAGCATCTTACTTATGATTATCAGTTTGTTCAATTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGCTGAGTGCAGGCGTAAGTTGGGGGTCCGACCTACCAAGCCTAAAACATCATCAGATGCTGCACTAAAATTAGTCGCATATCAGGTTTATCAGAATGGAGGTTTGCATATGGGACATTCTCATGCTATCGGTGTACCAAAGTACTCTCACAATTGCATTGGAGAAGTTGTTATGATAAATCACCCCACAAAAGAGAGGTGTTTTGGGATTATAAAGCGATTCGATAAATATTCCAAAAAACACACTATTATGTTTGAAGATGGTGATGTTGGTTCTATGGACTTGTCAGAAGTAGATTGGGAACTTGTGATGCAATTGTAG 1122 0.4002 MKRRWGRSRNSDSTRGNANMPAMKKNSEQTRLGFVFSKLANEIGDPVDFELPEWFNKWKTVSYVSIKRSILYIYVTKKVKRRLDDDGIFCSCTPSPGSSNVCGKYCHCGMLMSSCSSGCKCGSSCLNKPFQHRPTKKMKLVQTEKCGSGIVADEDIKQGDFVIEYVGEVIDDKTCEERLWNMKHRGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWIIDGETRIGIFATRDIRKGEHLTYDYQFVQFGADQDCHCGAAECRRKLGVRPTKPKTSSDAALKLVAYQVYQNGGLHMGHSHAIGVPKYSHNCIGEVVMINHPTKERCFGIIKRFDKYSKKHTIMFEDGDVGSMDLSEVDWELVMQL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1999 373 MobiDBLite consensus disorder prediction 1 23 - -
Lele05g1999 373 ProSiteProfiles SET domain profile. 136 253 IPR001214 GO:0005515
Lele05g1999 373 CDD SET_ASHR3-like 137 275 - -
Lele05g1999 373 SMART shorttest3 85 135 IPR006560 GO:0005634|GO:0018024
Lele05g1999 373 PANTHER SET DOMAIN PROTEINS 46 291 - -
Lele05g1999 373 SUPERFAMILY SET domain 60 271 IPR046341 -
Lele05g1999 373 ProSiteProfiles AWS domain profile. 85 134 IPR006560 GO:0005634|GO:0018024
Lele05g1999 373 SMART set_7 136 259 IPR001214 GO:0005515
Lele05g1999 373 ProSiteProfiles Post-SET domain profile. 259 275 IPR003616 -
Lele05g1999 373 Pfam SET domain 147 252 IPR001214 GO:0005515
Lele05g1999 373 Gene3D SET domain 53 292 IPR046341 -
Lele05g1999 373 FunFam Histone-lysine N-methyltransferase 49 291 - -
Lele05g1999 373 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 99 327 IPR025787 -
Lele05g1999 373 SMART PostSET_3 259 275 IPR003616 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1999 Lele-ChrLele05 14253154 14257768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1999 109 271 C2H2 Transcription Factor Family AT2G23740 34.426 8.93e-23 98.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele05g1999 SET 7.6e-20 No_clan