Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1994 ATGAGTGGTGCACCTAAGAGACCTCATGAAGAATCTGTTCATTCCTCATCAAAGCACCCACACGATGATTCGGGTTCATATTCTAAATTATCTTCATCTATTTCAAATGAGTATCATGTTCCTTATGACTTAGGACAGGATTCAAGGGTGACAAAGACACCCCGTATAGAATCTCGTGATGCAGACAGAAGATCTCCTCTCCACTCAGCGTATCGGATCCCATCTTCAACTGAGATACATTCAGATCATCCTGTAAGTGCTGAAAACAGGATGGAATCAAGGGATTCCAAGGAAATTAGAGATCTACGGGTTGAGAACCGTGACTTAAAGACTGAGAAGAAGGAATTCCATGGTGAGGCAAGGAGGGATTCTCAGAGTTCTAAAAGTGATAAGGATCTTCGTGTTGAAGGAAGAGGAGATGACACCAAGGATGTCAGGTATGATCGAGACAGTCACAATGATTCAAAAGGTGAAATTAAGACAGAAAAGGATGGTTATGGTGCAGTAAGTAGTAGCCACTTGAATTGGAAAGAATCTAAAGAATACCATCGGGGGAAAAGATTTTCTGAATCCCCCAGTGGGAATTTGGATTCCTGGCATATACCACGGGGAAATTCACAAGGCACTCTTGAGGTTGGGAAGGAGGGTTCAACTGCAGAAGAGAGAGATTATATGGAAGCTCATGAGGCTGTTGGAGAGAACAAAGTTGATCCAAAAGGTGAAGATAAATTTAAGGAGAAAGATAGAAAAAGGAAGGATGTGAAGCATCGAGATTGGGGGGAGAGGGACAAAGAAAGAAGTGAACGTAGAAGCAGCACGCCAGTAATTAATACAAGTAGTGACAACAAAGAATCTGCCAAAGAAGATAGAGATGTTGAAAGGTGGGACAGGGAGAGGAGAGATCTTCCTAAAGACAGGGAAAATGTAAAGGAGAAGGAAAAGGATCATGTTAAGAGGGAACCATGGAATGGAGTGGAGAAACAGGCTTCACATATTGAGAAGGAGACTGGTGAGGCATCAGTTAAAATGACAGAGCATGAAAATGCTGCACCAGAGCAGAAGAAACAGAAAGATTTTGAAAGCTGGAAAAATGTTGATAGGGAGGCTAGAGAAAGGAGGAAAGAAAGGGAGAATGATTTAGAAGGAGATAGACCTGAGAAGCGTATTAGGTGCCCTGACAAGGAATCAGATGATGGATGTGCTGATGGGGAAGGAGCCACAGAGAAGGAAAGCGAAGTCTATAATTGTAGTGTTCAGCAACGTAAGAGGATGCAACGGTCAAGGGTGAGTCCTCAGGTGGCTAATCGTGAACCTCGTTTTAGACCCCGTGCTCAAGACAATGAAGGGTCGCAAGGGAAAGTAGAAGTATACTCCGTTATTTATAAAGTTGGTGAATGCATGCAAGAACTGATTAAGTTGTGGAAGGAATTTGAATCTTCTCAAATGGAGAAAACTGGTGAAAGCACTAATAATGGTCCAACTCTTGAAATTCGGATACCAGCTGAGCATGTTACTGCTACTAACCGCCAAGTTAGAGGAGGCCAGCTATGGGGGACTGATGTGTACACATATGACTCAGATCTTGTTGCTGTTCTCATGCATACAGGTTACTGTCGACCAACGGCTTCTCCACCTCCTGCTGCAATACAAGAGCTGTGCACAGTCATTCGGGTGCTGCCGCCTCAGGATTGTTATATTTCTACCTTGAGAAACAATGTTCGCTCTCGTGCTTGGGGTGCTGCAATTGGTTGTAGTTATCGAGTTGAGCGGTGCTGCATTGTGAAGAAAGGAGGTGGAACTATTGATCTTGAACCTTGCCTTACACATACATCAACAGTTGAACCCACCCTTGCTCCATTGGCTGTTGAGCGGACAATGACCACTAGGGCTGCAGCTTCGAATGCATTGCGTCAGCAAAGATTTGTTCGAGAGGTCACCATACAATACAACCTCTGCAATGAGCCTTGGATCAAGTACAGTATAAGCATTGTAGCTGACAAAGGTCTGAAGAAGTCTCTCTACACATCTGCTCGTTTGAAGAAGGGAGAAGTTATGTATTTGGAGACCCATTCGCGCAGATATGAGCTTTGCTTTACTGGAGAGAAAATGATTAAAACACCAGCATCACAAACACATGACGCAGGCATAGAAAAGTCTCAAAATCACCACTCTCATTCTGCAAATGGTGATAAATTTGATAGCGATAATGTCATGATTGATGTATTTCGATGGGGTCGTTGTAAGAAGCCTCTGCCACAGAAAGCAATGCGAACGATTGGGATCCCTCTGCCCCTTGAACATGTGGAGGTATTGGAGGAGAATTTGGACTGGGAAGATCTACAGTGGTCACAGACTGGTGTTTGGGTTGCCGGAAAGGAATATACCCTGGCCCGTGTGCATTTCTTGTCAATGCATTAG 2418 0.4392 MSGAPKRPHEESVHSSSKHPHDDSGSYSKLSSSISNEYHVPYDLGQDSRVTKTPRIESRDADRRSPLHSAYRIPSSTEIHSDHPVSAENRMESRDSKEIRDLRVENRDLKTEKKEFHGEARRDSQSSKSDKDLRVEGRGDDTKDVRYDRDSHNDSKGEIKTEKDGYGAVSSSHLNWKESKEYHRGKRFSESPSGNLDSWHIPRGNSQGTLEVGKEGSTAEERDYMEAHEAVGENKVDPKGEDKFKEKDRKRKDVKHRDWGERDKERSERRSSTPVINTSSDNKESAKEDRDVERWDRERRDLPKDRENVKEKEKDHVKREPWNGVEKQASHIEKETGEASVKMTEHENAAPEQKKQKDFESWKNVDREARERRKERENDLEGDRPEKRIRCPDKESDDGCADGEGATEKESEVYNCSVQQRKRMQRSRVSPQVANREPRFRPRAQDNEGSQGKVEVYSVIYKVGECMQELIKLWKEFESSQMEKTGESTNNGPTLEIRIPAEHVTATNRQVRGGQLWGTDVYTYDSDLVAVLMHTGYCRPTASPPPAAIQELCTVIRVLPPQDCYISTLRNNVRSRAWGAAIGCSYRVERCCIVKKGGGTIDLEPCLTHTSTVEPTLAPLAVERTMTTRAAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKSLYTSARLKKGEVMYLETHSRRYELCFTGEKMIKTPASQTHDAGIEKSQNHHSHSANGDKFDSDNVMIDVFRWGRCKKPLPQKAMRTIGIPLPLEHVEVLEENLDWEDLQWSQTGVWVAGKEYTLARVHFLSMH 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1994 805 MobiDBLite consensus disorder prediction 716 730 - -
Lele05g1994 805 MobiDBLite consensus disorder prediction 7 25 - -
Lele05g1994 805 MobiDBLite consensus disorder prediction 412 432 - -
Lele05g1994 805 MobiDBLite consensus disorder prediction 1 449 - -
Lele05g1994 805 MobiDBLite consensus disorder prediction 282 409 - -
Lele05g1994 805 MobiDBLite consensus disorder prediction 83 163 - -
Lele05g1994 805 Gene3D - 479 590 IPR036609 -
Lele05g1994 805 MobiDBLite consensus disorder prediction 176 190 - -
Lele05g1994 805 Coils Coil 99 119 - -
Lele05g1994 805 MobiDBLite consensus disorder prediction 709 730 - -
Lele05g1994 805 MobiDBLite consensus disorder prediction 50 67 - -
Lele05g1994 805 SUPERFAMILY LCCL domain 513 581 IPR036609 -
Lele05g1994 805 Pfam Histone deacetylation protein Rxt3 496 538 IPR013951 GO:0016575
Lele05g1994 805 MobiDBLite consensus disorder prediction 215 271 - -
Lele05g1994 805 MobiDBLite consensus disorder prediction 191 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1994 Lele-ChrLele05 14185562 14194101 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele47g1091 47 16583877 16594594 Lele05g1994 05 14185562 14194101 CCT
Lele48g1153 48 16150300 16153909 Lele05g1994 05 14185562 14194101 CCT
Lele45g0297 45 2384533 2397818 Lele05g1994 05 14185562 14194101 CCT
Lele46g0325 46 2182626 2192762 Lele05g1994 05 14185562 14194101 CCT
Lele05g1994 05 14185562 14194101 Lele07g2040 07 13654657 13662914 hybridization
Lele05g1994 05 14185562 14194101 Lele08g1832 08 12711766 12719818 hybridization