Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1992 ATGGCATACACAGAGCCACTTCTGGTGAAGAGGACTAACACCACCTCGCAGATTGCCATAGTTGGTGCCAACCTTAGCCCCATTGAAAGCCTTGATTATGAGATTTTTGAGAATGAAATGTTTAAGCAGGACTGGAGATCAAGGAGCAAGATTCAGATATTCCAGTATGTGCTACTTAAGTGGGGATTTGCTGCTCTTATTGGATTAGGCACTGGGCTACTTGGCTTCCTCAATAACATTGCTGTTGAGAATATAGCTGGTTTCAAGCTGCTTCTGGTAACCAACCTCATGTCTGCACACAGATATATTCTAGCATTTGTGGCATTAGCTGGTTGCAATATAGGTTTAGCAGCGGCAGCCGGATCTCTTTGTGCTTTCATTGCTCCAGCAGCAGCAGGCTCTGGAATTCCTGAGGTGAAAGCATATCTCAATGGTATTGATGCTCACAATATACTGGCTCCGACCACTCTTTTTGTGAAGGTTTTTGGTGCCATCCTTGGAGTTTCTGCTGGATTTGTGGTGGGCAAAGAGGGGCCTATGGTACACACAGGTGCATGCATTGCTTCCTTGTTAGGGCAGGGTGGATCCCGCAAGTATCATTTAACTTGGACCTGGCTAAGGTATTTTAAAAATGATCGGGACCGGCGAGACATGATTACTTGTGGTGCTGCAGCTGGCGTTGCTGCTGCATTTCGTGCTCCTGTGGGTGGTGTTCTTTTTGCCCTTGAAGAGGCTGCTTCATGGTGGAGGAGTGCTCTCCTTTGGAGGACATTTTTCACTACAGCAGTAGTTGCTATTGTTTTGAGAGCCGGAATTCAGTACTGTGCCACAGGAAAATGTGGGCTATTTGGTGAAGGTGGTTTGATAATGTACGATGTCAGTGCAGCCAAAGTATCATACACTGGCGCTGATATACTAGCAGTATTACTCTTAGGAACACTCGGAGGCATTCTTGGAAGCATATATAATTGTTTTGTGGATAAGGTTGTTCGTACATATAGCATCCTGAATGAAAGAGGTCCAGGTTTCAAAATTCTCATTGTTGTCGCAATTGCTTTTTTGACATCATGTTGTGCTTATGGCCTGCCATGGTTAGCAACGTGCATCCCCTGTCCTGATGATCCGAATGTGAGCTGTCCCACTGTTGATGAGTCTGGCAACTACAAGAGCTTTCAATGTCAACCGGGATATTACAATGATCTTGCTTCACTTTTTCTAAACACCAATGATGATGCTATTCGCAACCTATTCAGCACCAGGACTTTCAAAGAATTCCACATCTCCAGTCTCTTTACCTTCTTTGTAACTATTTACTTTCTTGGGGTAGTCACATATGGTATTGCTATTCCATCTGGGCTTTTCATTCCTGTGATATTGGCGGGTGCTGCATATGGTCGGCTTGTAGGGAGACTATTGGAGTCAATTTCAAAACTTGATACTGGATTATACGCTCTCCTTGGAGCTGCCTCCTTCCTTGGTGGTACCATGAGAATGACGGTATCCCTTTGTGTTATATTGCTAGAACTCACCAATGATCTCTTGTTACTTCCGCTTGTGATGTTGGTCTTGTTAATCTCAAAAACTGTGGCTGATTGCTTCAACAAGGGTGTCTACGATCAAATACTGAAGATAAAAGGACTTCCATATATGGAGGCCCATGCTGAACCTTATATGAGGAATTTAGTGGCACGAGATGTGGTCTCTGGTCCCCTAGTCACTTTCTCTGGCATTGAAAAGGTAAGGAATATACTAGATGCTCTGAAAACCACAGGGCATAATGGGTTTCCTGTCATCGATGAACCGCCATTCTCAGATGCACTGGAATTGTGTGGGCTTGTTCTTAGGTCTCATCTGCTAGTGCTATTGAAGGGGAAGAACTTCTCTAAAGAGAGGGTGCTTACAAGTCGAAACATCTTACAAAGAATTTCTGCATTAGATTTTGCAAAGGCAGGATCAGGGAAAGGAAATAAACTAGAGGATCTAGATATTGAAGAGGAAGAGATGGATATGTATGTTGATCTCCACCCGATTGCCAATGCATCCCCATACACGGTGGTTGAGACCATGTCACTCGCTAAAGCCGCTATTCTTTTCCGCCAACTTGGTCTTAGGCACATGTGTGTGGTCCCTAAGGGTCAAGGGAGGCCTCCAGTTGTTGGGATTCTGACACGCCATGACTTCATGGAGGAGCATGTCCATGGACTTTACCCTCATATGAAACCTCGCAGGTGGACTGAGTGA 2241 0.4476 MAYTEPLLVKRTNTTSQIAIVGANLSPIESLDYEIFENEMFKQDWRSRSKIQIFQYVLLKWGFAALIGLGTGLLGFLNNIAVENIAGFKLLLVTNLMSAHRYILAFVALAGCNIGLAAAAGSLCAFIAPAAAGSGIPEVKAYLNGIDAHNILAPTTLFVKVFGAILGVSAGFVVGKEGPMVHTGACIASLLGQGGSRKYHLTWTWLRYFKNDRDRRDMITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAIVLRAGIQYCATGKCGLFGEGGLIMYDVSAAKVSYTGADILAVLLLGTLGGILGSIYNCFVDKVVRTYSILNERGPGFKILIVVAIAFLTSCCAYGLPWLATCIPCPDDPNVSCPTVDESGNYKSFQCQPGYYNDLASLFLNTNDDAIRNLFSTRTFKEFHISSLFTFFVTIYFLGVVTYGIAIPSGLFIPVILAGAAYGRLVGRLLESISKLDTGLYALLGAASFLGGTMRMTVSLCVILLELTNDLLLLPLVMLVLLISKTVADCFNKGVYDQILKIKGLPYMEAHAEPYMRNLVARDVVSGPLVTFSGIEKVRNILDALKTTGHNGFPVIDEPPFSDALELCGLVLRSHLLVLLKGKNFSKERVLTSRNILQRISALDFAKAGSGKGNKLEDLDIEEEEMDMYVDLHPIANASPYTVVETMSLAKAAILFRQLGLRHMCVVPKGQGRPPVVGILTRHDFMEEHVHGLYPHMKPRRWTE 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1992 746 PRINTS Chloride channel signature 449 469 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele05g1992 746 PRINTS Chloride channel signature 129 146 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele05g1992 746 PRINTS Chloride channel signature 160 179 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele05g1992 746 PRINTS Chloride channel signature 481 497 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele05g1992 746 PRINTS Chloride channel signature 499 518 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele05g1992 746 PRINTS Chloride channel signature 224 243 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele05g1992 746 PRINTS Chloride channel signature 537 551 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele05g1992 746 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 10 733 - -
Lele05g1992 746 Pfam Voltage gated chloride channel 117 531 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele05g1992 746 Gene3D - 551 733 IPR046342 -
Lele05g1992 746 ProSiteProfiles CBS domain profile. 678 738 IPR000644 -
Lele05g1992 746 SUPERFAMILY CBS-domain pair 554 730 IPR046342 -
Lele05g1992 746 Gene3D Clc chloride channel 52 550 - -
Lele05g1992 746 PRINTS Plant CLC chloride channel signature 259 269 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele05g1992 746 PRINTS Plant CLC chloride channel signature 401 417 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele05g1992 746 PRINTS Plant CLC chloride channel signature 245 253 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele05g1992 746 PRINTS Plant CLC chloride channel signature 277 284 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele05g1992 746 PRINTS Plant CLC chloride channel signature 34 42 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele05g1992 746 Pfam CBS domain 680 729 IPR000644 -
Lele05g1992 746 FunFam Chloride channel ClC3 52 369 - -
Lele05g1992 746 SMART cbs_1 681 732 IPR000644 -
Lele05g1992 746 SMART cbs_1 570 623 IPR000644 -
Lele05g1992 746 CDD CBS_pair_voltage-gated_CLC_euk_bac 563 730 - -
Lele05g1992 746 SUPERFAMILY Clc chloride channel 38 552 IPR014743 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1992 Lele-ChrLele05 14171980 14177613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1992 1 743 Ion Channels AT5G49890 74.094 0.0 1108