Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1978 ATGAGAAAAAATCATTCAGAGTCAGAGCTATGGCTAGTTACATTTTTGGCGCTTTTGATCACTCTGTTAGTTGCAAAACTAATACAATCGAGGTTGAAGAAGGCAGAGAAACGAACACAGTGGCTGTTGCCTCCGGGAAGAAAAGGATGGCCTTTGATCGGTGACAGCATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCATCAATTTGTTGAAGAAATGGTTCAAAGCCTATTTGGGAAATGGGCAGTGGTGTCAGCAGATCCTCGCTTTAACCGTTTTGTGATGCAAAACGAAGGGAAATTATTTCAGTCGAGTTATCCGAAATCATTCAGAGATTTGGTTGGTAAGAATGGTGTGATCACAGTGCAAGGAGAACAGCAAAGGAAGCTGCATGGGATTGCCTCCAACATGATGCGCTTAGAGAAGCTGAAGTTCCATTTCTTGAATGATATTCAGAAAGATGAGCAAGAATCTGTGAGGAATTTTGTCATATCAAAGGGATGCTTTGTGGTTCCATTTCTATCAGCAGTTCATTTGGATGAGAATGTGTACAAAGGAGCTTCAGACTTCAATCCATGGAGATGGATAGAGCCTGGGAATGAGGAAAAGAAGAACTGGAGAAGTAGTCCATTCTATGCTCCCTTTGGAGGAGGTGTTAGATTCTGTCCTGGAGCAGAGTTGGCTCGTCTTCAAATTGCTCTTTTTCTTCATTACTTTGTAACTACACATAGTTCCCATCGAAAAGAAAAAACGTTCGTGGTTGGGGCGACACTGGGGAGAAGTAGCACGATGGCTAGTGATGAAGTAAAATCAGAGGAAGAGGAGGAGGCAGCAATGGTGAATCTGGGTTCGTACGGCGGTAAGGTGAGATTGCTGGTTGAAGGGGAGGAATCTGCTGCGGAAGAGATCATGCTTCTCTGGGGAATCCAACAGCCTACACTTTCCAAACCCAACGCCTTCGTCTCCCAATCTTCCCTCAACCTCCGTCTCGACTCCTGCGGCCACTCTCTCTCCATTCTTCAGTCCCCTTCTTCCTTGAGTACACCTGGAGTGACTGGATCGGTGATGTGGGACAGTGGAGTTGTATTGGGTAAGTTTCTAGAACATTCTGTTGACTCAGGGATGCTTGTTCTTCAAGGAAAGAAGATTGTTGAATTGGGATCTGGTTGCGGTTTGGTTGGTTTCATTGCAGCTCTTCTGGGTGGCCAAGTCATTCTCACTGATTTGCCTGATAGGCTGAGGCTTCTTAGAAAGAACATTGAAACTAACATGAAACATGTGGACGTGCGGGGTACCGCGTCAGCTACAGAACTCATATGGGGTGAAGATCCTGACCTAGAGCTCACTGAACCTGCGCCTGATTATGTGCTAGGATCTGATGTAGTATATAGTGAGAATGCTGTTGTGGATTTGCTAGTGACACTAGGACAGCTCTCTGGGCCCAAAACGACAATATTCTTGGCCGGGGAACTACGAAACGATGCCATTCTTGAGTACTTCATTGAAGCAGCGATGAAAAATTTTACAATCGGGCGGGTGGATCAAACTCTATGGCATCCTGATTATCACAGTAATCGTGTTGCTCTCTATATTCTGGTCAAGAAGTGA 1614 0.4511 MRKNHSESELWLVTFLALLITLLVAKLIQSRLKKAEKRTQWLLPPGRKGWPLIGDSINWYNAVASSHPHQFVEEMVQSLFGKWAVVSADPRFNRFVMQNEGKLFQSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDIQKDEQESVRNFVISKGCFVVPFLSAVHLDENVYKGASDFNPWRWIEPGNEEKKNWRSSPFYAPFGGGVRFCPGAELARLQIALFLHYFVTTHSSHRKEKTFVVGATLGRSSTMASDEVKSEEEEEAAMVNLGSYGGKVRLLVEGEESAAEEIMLLWGIQQPTLSKPNAFVSQSSLNLRLDSCGHSLSILQSPSSLSTPGVTGSVMWDSGVVLGKFLEHSVDSGMLVLQGKKIVELGSGCGLVGFIAALLGGQVILTDLPDRLRLLRKNIETNMKHVDVRGTASATELIWGEDPDLELTEPAPDYVLGSDVVYSENAVVDLLVTLGQLSGPKTTIFLAGELRNDAILEYFIEAAMKNFTIGRVDQTLWHPDYHSNRVALYILVKK 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1978 537 Pfam Cytochrome P450 160 244 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele05g1978 537 Gene3D Cytochrome P450 32 157 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele05g1978 537 Pfam Lysine methyltransferase 354 503 IPR019410 -
Lele05g1978 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 217 226 IPR017972 GO:0005506|GO:0016705
Lele05g1978 537 SUPERFAMILY Cytochrome P450 161 246 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele05g1978 537 PRINTS E-class P450 group I signature 214 224 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele05g1978 537 PRINTS E-class P450 group I signature 224 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele05g1978 537 PRINTS E-class P450 group I signature 175 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele05g1978 537 Gene3D Cytochrome P450 158 255 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele05g1978 537 Gene3D Vaccinia Virus protein VP39 337 537 IPR029063 -
Lele05g1978 537 SUPERFAMILY Cytochrome P450 43 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele05g1978 537 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 378 508 IPR029063 -
Lele05g1978 537 PANTHER CYTOCHROME P450 26 162 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1978 Lele-ChrLele05 14031581 14038079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1978 127 245 Cytochrome P450 AT1G73340 59.664 1.33e-42 157