Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1964 ATGGATATTAAATTTGAACTTGAGAAGATTCTCGAGCGCTTTGAGGAAGAAGGTCGGTTAATATATCCAGTATTCTATTATGTGGATCTATCAGATTTGCGACGACCAGGAGGAAGTTATGCAAAAGCCTTGGCTGGACTAGAGAAAAGATTCAAAGACAACAAGCACAAGGTCCAGAAATGGAAGGAGGCTTTGTCTCGAGCTGCTGGACTCAAAGGCTGTCATCTCAAATCTGAGATTGTTAAAGAACACGAATATATTACAGAGATCGTCAATGAAGTATCGGCTAGGATTAATCATAATCATAGTCCTTTTGACTTTACTGATTATCCTGTTGGACTTGTGCCTCGAGTGGAAGAAGTGGTCTCACTTTTAGATCTTTGGTCTACCACGCAAACTATAATGGTAGGAATTATTGGTCCTGGTGGGATAGGCAAATCAACGATTGCAAGAGCGGTGTATAATTCGATTAATCATCATTTTGAAGGCTTATGTTTTCTTTCTAACAAGTTCCACAATTTAAGTTGCATAGCTCTCAGAAACTGCGAATCTCTACGACAAACCCCAGATTTATCTGGCGTTTCTAATTTAAGAGAATTGTGTCTCAATGGTTGTGCAAATTTAGTTGAAATCCATCATTCAGTTGGATGTTTAAATAAATTGAAGGAATTGAGTGCCATGCGATGCAATAAGTTGGAGATTCTGCCTCCAGACCTTAGGTTGACGTCTCTTGAGCATCTCAACCTCTTTGGTTGTTCAAGTCTTCAAAGTTTCCCGGAGATATTAGTCGAGATGAAAGATATGCGAACACTTGATTTAGATAGGACAGCCATTATTTCATTGCCATCTTCAATTTGCAACCTCACTGGGCTTGAAACCTTGAACATGGAAGAATGTCCTTATCTTGAGCAACTACCAACCACCATTTGTCAGTTGCCAAACCTTTGGGCAATAAACGCAAATTTTTCTGAAGTAATGACGCATTTTAAGATGTGTGATGGTGGGGAAGAAGCAAACTTGGATTGTGATGCACTGTCTTTGAAATTGGAGCATTTTTGTTTCTCAAATTGCAATTTATCAAATGACTCCCTTGCTCTTTGCCTCTCTTACTTCACTAATATTATACGTTTAGATCTAAGTTTCAATTATTTTACAACCCTTCCAGCATGCATCAAAGAATGTCACCGCCTGACATATCTTTTACTGGATCATTGCGATCGACTTCAACATATTGAGGAGATGCCACCAAACTTGGAAAAATTCAGTGCCTTATGTTGCATGTCATTGACTGAGTCATCTAAAAGCAAAGTATTGTATCAGGCACTCAACTTGCAACCTGGGAAAAGAATTTTTATTTTTCCTGGAGGGAAATTCCCAGAAAATCTCGGCAAGTATTGCCAGCGAAGCTATGTGTCTTTTTGGGTTCGTGATGTGTTCCCAACAATTTTTCTATGGATTATTGTTAAAGATCATCAGGATTTTCTCTCCAATTGTACATTCCTGGTGCACGTCAATGACACCAAGCTAGATATTTCTTCTGAGTGGCTTTTGTTATCAACAATCAAGATGGGTCATTTATGTATATGTGATCTGCGAAGTATAATTCCTGAGGCCGAACTCCCCCATGGGTATAATTGGAAGCATGTGAAGGTTTCCATCAAGAGCAATACAACACAAGAAATAAATAGTGGAAGGGATCAATTTCATTTTGCCCTTCATGTCTACAAGCAACAAAATAACTCAGAAACTATCAGATTTGAGGACCCTAGAACAACATACGTGGATAGCAACTCGTGGCAAAGAGTACAACAACAACCACAAGATTGGAAAGAACTTGAAGGCGACATGAGTTACCACGGCGTAGATCCAACTGTGGTCAGGCTCAAGGCACATCTTTCACCAGAAGAAGAAGAAGATCTCAAGGCAAAGCGAGCGGTGCTCCCATCCGGATGGACTTATGATGTGTTTTTGAGTTATAGAGCTAAATCAAGAGGCTGTTGCTATCGCAATCCCAGCAAGGATGCAACAGAATGCGAGGATATCATTAAAACGATCATCAAGGAAGTCTCTGTAAAGATTCATAAATTTCCTTTTCTCTTCGTTCTGAAAGATTCAGTGCAACTGGAGTTGCGGGTGCCACAAGTAATCTCACTTGGGGATGTTGGGTCTAATGAGGAAGTCAAAATAGTCGGAATTTGTGGAGTAGGCGCATCGACAATAGCACGGGTTGTGTGTAATTATGCTGCTCGTCATTTTGAAGATTTATGGTATTTTGAATGTGGTTTTGAAATCGCCAGGGACGCCGATATCACATTGGATGGTTTCCTGAATGCTATAATAAGACAACCCAGGTTCCCACGGAAGAAGATTCTTTTAATTCTTGATTTTGAACCACGGGGTCTGGTTATGCAAGCACTAAGAGAATGTGATCGGTTTGGTCAAGGAAGCAGGATCATTGTCGTGACAAGGGATAAACAGTCGTTTCCAAGTCAGTATGATAAAGAACGATCCATTATTTTCCTTGACCTTGACGCAAAAAGTCAGAATACTGAGACACAGAAAGAGAACCCAAAAACTCCTGGGTTGGAGTCTTTTCACTACAAAACAAAAAGTTATTTTCCGCGGTTTTTCTATGGTATTTAG 2643 0.3992 MDIKFELEKILERFEEEGRLIYPVFYYVDLSDLRRPGGSYAKALAGLEKRFKDNKHKVQKWKEALSRAAGLKGCHLKSEIVKEHEYITEIVNEVSARINHNHSPFDFTDYPVGLVPRVEEVVSLLDLWSTTQTIMVGIIGPGGIGKSTIARAVYNSINHHFEGLCFLSNKFHNLSCIALRNCESLRQTPDLSGVSNLRELCLNGCANLVEIHHSVGCLNKLKELSAMRCNKLEILPPDLRLTSLEHLNLFGCSSLQSFPEILVEMKDMRTLDLDRTAIISLPSSICNLTGLETLNMEECPYLEQLPTTICQLPNLWAINANFSEVMTHFKMCDGGEEANLDCDALSLKLEHFCFSNCNLSNDSLALCLSYFTNIIRLDLSFNYFTTLPACIKECHRLTYLLLDHCDRLQHIEEMPPNLEKFSALCCMSLTESSKSKVLYQALNLQPGKRIFIFPGGKFPENLGKYCQRSYVSFWVRDVFPTIFLWIIVKDHQDFLSNCTFLVHVNDTKLDISSEWLLLSTIKMGHLCICDLRSIIPEAELPHGYNWKHVKVSIKSNTTQEINSGRDQFHFALHVYKQQNNSETIRFEDPRTTYVDSNSWQRVQQQPQDWKELEGDMSYHGVDPTVVRLKAHLSPEEEEDLKAKRAVLPSGWTYDVFLSYRAKSRGCCYRNPSKDATECEDIIKTIIKEVSVKIHKFPFLFVLKDSVQLELRVPQVISLGDVGSNEEVKIVGICGVGASTIARVVCNYAARHFEDLWYFECGFEIARDADITLDGFLNAIIRQPRFPRKKILLILDFEPRGLVMQALRECDRFGQGSRIIVVTRDKQSFPSQYDKERSIIFLDLDAKSQNTETQKENPKTPGLESFHYKTKSYFPRFFYGI 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1964 880 Pfam NB-ARC domain 118 167 IPR002182 GO:0043531
Lele05g1964 880 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 618 827 IPR044974 GO:0006952
Lele05g1964 880 Gene3D - 102 211 IPR027417 -
Lele05g1964 880 Gene3D - 3 101 IPR035897 -
Lele05g1964 880 Pfam TIR domain 5 97 IPR000157 GO:0007165
Lele05g1964 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 720 830 IPR027417 -
Lele05g1964 880 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 73 IPR035897 -
Lele05g1964 880 SUPERFAMILY L domain-like 165 431 - -
Lele05g1964 880 Gene3D Ribonuclease Inhibitor 339 445 IPR032675 -
Lele05g1964 880 ProSiteProfiles TIR domain profile. 1 98 IPR000157 GO:0007165
Lele05g1964 880 Gene3D Ribonuclease Inhibitor 239 331 IPR032675 -
Lele05g1964 880 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 170 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1964 Lele-ChrLele05 13851279 13860878 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1964 147 319 WRKY Transcription Factor Family AT4G12020 36.416 3.79e-17 85.1