Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1956 ATGTTGATTGTTAAAGAACACGAATATATTACAGAGATCGTCAATGAAGTATCGGCTAGGATTAATCAAAATCATAGTCCTTTTGACTTTACTGATTATCCTGTTGGACTTGTGCCTCGAGTGGAAGAAGTGGTCTCACTTTTAGATCTTTGGTCTACCACTCAAACTAAAATGGTAGGAATTATTGGTCCTGGTGGGATAGGCAAATCAACGATTGCAAGAGCGGTGTATAATTCGATTAATCATCATTTTGAAGGCTTATGTTTTCTTTCTAACGAATTGAGTGCCATGCGATGCACTAAGTTGGAGATTTTGCCTCCAGACCTTAGTTTGACGTCTCTTGAGCATTTCAACCTCTTTGGTTGTTCAAGCCTTCAAAGTTTCCCGGAGACATTAGTCGAGATGAAAAATATGCGAACACTTGATTTAGATAGGACAGCCATTACTTCATTGCCATCTTCAATTTGCAACCTCACTGGACTTGAAACCTTAAACATGGAGGAATGTCCTTATCTTCAGCAACTACCAACTACCATTTGTCTGTTGTCAAACCTTTGGGCACTAAACGCAAATTTTTCTAAAGTCATGACGAGTTTTAAGATGTGTGATGGTGGAGAAGAAGCAAACTTGGATTGCTACGCACTGCCTTTGAAATTGGAACATTTTTGTTTCTCAAATTGCAATTTATCAGATGACTCCCTTGCTCTTTGCCTCTCTTACTTCACTAATATGATACGTTTAGATCTAAGTTTCAACGATTTTACAACCCTTCCAGCATGCATCAAAGAATGTCACCGTCTGAGATATCTTTTACTGGATCATTGCCAGCGACTTCAACATATTGAGGAGATGCCACCAAACTTGGAAAAATTCAGTGCCATATGTTGCACGTCATTGACTAGGTCATCTAAAAGCAAAGTATTGTATCAGGCACTCAACTTGCAACCTGGGAAAAGAAACTTCATTTTTCCTGGAGTAAAATTCCCAGACAATCTTGACAGTTATAGCAGCAGGGGAAGCTGTGTGTCATTTTGGGTTCGTGATGTGTTGCCAACAATTTTTCTATGGATTATTGTTAAAGATGATCAGGATTTTCTCTCCAATTGTACATTCCTGGTGCACGTCAATTACACCAAGCTAGATATTTCTTCAGAGTGGCTTTTGTTATCAACAATCAAGATGGGTCATTTATATATATGTGATCTGCAAAGTATAATTCAAAAGGCCGAACTCCCCCATGGGTGTAATTGGAAGCATGTGAAGGTTTCCATCAAGAGCAATACAACACAAGAAATAAATAGTGGAAGGGATCAATTTCATTTTGCCCTTCATGTCTACAAGCAACAAAATAACTCAGAAACTATCAGATTCGTGGACCCTAGAACAACGTACGTTGATAGCAGCTCGTGGCAAAGAGTACAACAACAACCACAAGATTGGAAAGAACTTGAAGCCGACATGCTTTACCAAGACCTAGATCCAACTGTGGTCAGGCTCAAGGCACATCTTTCACCAGAAGAAGAAGAAGATCTCAAGGCAAAGCGCGCGGTGCTCCCATCCGGATGGACTTATGATGTGTTTTTGAGTTATAGAGGTGGCCAGGATATTCTTGAAAGGATCATCAGGGAAGTCTATGGAAGGATTGATATATTTCCTTTTCGCGTCGTTCCGAAAGATTTAGTGGGACTTGATGAGTCGCGGGTACAAGAAGTAATCTCACTTGTGGATGTTGGGTCTAATGAGGAAGTTAAAATAGTCGGAATTTGTGGAGTAGGCACATCAATAATAGCACGTGCTGTGTGTAATTATGCTGCTCGTCATTTTGAAGATTTATGGTATTTTTCTGGTTATAATGAAATCGCCAGGGGCGCCTATTTTGGCACATCGTATGATGATTTCCTTAATAGACAACCCAGCAGATTCCCACAGAAGAAGGTTCTTGTAATTTTTGATAATCTTTGGACATTGGATCGCTCAGAGACACAGGTTGCTCGGGGTTCTGTCGATCGAAACCTTTTTCAGACTATGTGGACCATTATAACTGGTGCAAATACTTTAGCCACGTCCCAAAAGCTAGTGTAG 2082 0.4011 MLIVKEHEYITEIVNEVSARINQNHSPFDFTDYPVGLVPRVEEVVSLLDLWSTTQTKMVGIIGPGGIGKSTIARAVYNSINHHFEGLCFLSNELSAMRCTKLEILPPDLSLTSLEHFNLFGCSSLQSFPETLVEMKNMRTLDLDRTAITSLPSSICNLTGLETLNMEECPYLQQLPTTICLLSNLWALNANFSKVMTSFKMCDGGEEANLDCYALPLKLEHFCFSNCNLSDDSLALCLSYFTNMIRLDLSFNDFTTLPACIKECHRLRYLLLDHCQRLQHIEEMPPNLEKFSAICCTSLTRSSKSKVLYQALNLQPGKRNFIFPGVKFPDNLDSYSSRGSCVSFWVRDVLPTIFLWIIVKDDQDFLSNCTFLVHVNYTKLDISSEWLLLSTIKMGHLYICDLQSIIQKAELPHGCNWKHVKVSIKSNTTQEINSGRDQFHFALHVYKQQNNSETIRFVDPRTTYVDSSSWQRVQQQPQDWKELEADMLYQDLDPTVVRLKAHLSPEEEEDLKAKRAVLPSGWTYDVFLSYRGGQDILERIIREVYGRIDIFPFRVVPKDLVGLDESRVQEVISLVDVGSNEEVKIVGICGVGTSIIARAVCNYAARHFEDLWYFSGYNEIARGAYFGTSYDDFLNRQPSRFPQKKVLVIFDNLWTLDRSETQVARGSVDRNLFQTMWTIITGANTLATSQKLV 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1956 693 SUPERFAMILY L domain-like 99 412 - -
Lele05g1956 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 93 IPR027417 -
Lele05g1956 693 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 92 IPR044974 GO:0006952
Lele05g1956 693 Gene3D Ribonuclease Inhibitor 123 315 IPR032675 -
Lele05g1956 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 547 661 IPR027417 -
Lele05g1956 693 SMART LRR_typ_2 135 158 IPR003591 -
Lele05g1956 693 SMART LRR_typ_2 241 264 IPR003591 -
Lele05g1956 693 Pfam NB-ARC domain 41 90 IPR002182 GO:0043531
Lele05g1956 693 Gene3D - 20 106 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1956 Lele-ChrLele05 13728918 13738961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1956 99 189 WRKY Transcription Factor Family AT4G12020 45.055 1.89e-12 69.3