Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1923 ATGCCTTACATCTACTACAACAACAGGAGAAAAAGAGGAGGCAGCAAAGACAACATGGCCAGGGTCGGGTTACCACCGGGTTTTCGGTTCCATCCGACCGATGAAGAGCTTGTCAATTACTATCTTAAGAGGAAGATCAATGGCGAAGAAATTGAACTTGACATCATTCCGGAGATTGATCTCTACAAATGTGAACCTTGGGAACTTGCAGATAAGTCATTTCTGCCAAGTAGAGATCCAGAGTGGTACTTCTTTGGACCCAGAGACAGGAAATACCCTAATGGTTTCAGAACTAACAGAGCAACAAGAGCTGGGTACTGGAAGTCCACTGGCAAGGACAGAAGGGTCACTTCCCAAAACAGACCCATTGGCATGAAGAAAACTCTTGTTTACTACAGAGGCAGAGCCCCTCAAGGCATCAGAACTGACTGGGTCATGCACGAGTATCGCCTCGACGACAAAGAATCCGAGGACGCCTCCGGAATACAGGATACTTATGCATTATGCCGTGTGTTCAAGAAAAATGGAATCTGCTCTGAAATTGAAGAGCAGGGACAGAGTAGTTTAACACTAATTGAGAGCTCACAAACCCTAAATATTAACACTAATGAAAGTGAAACCATGTCTCCAGATCCAGCTGGGGCATCTTCTTCATGCTTGGAGGAAGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGATGATGCATGGTATCCTTCTAATGCAACCATGGCAGGTTGTGAAGAAGTTTCTCATTTTACATTCACAAACTGA 777 0.4427 MPYIYYNNRRKRGGSKDNMARVGLPPGFRFHPTDEELVNYYLKRKINGEEIELDIIPEIDLYKCEPWELADKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTSQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKESEDASGIQDTYALCRVFKKNGICSEIEEQGQSSLTLIESSQTLNINTNESETMSPDPAGASSSCLEEEDKDDSWMQFITDDAWYPSNATMAGCEEVSHFTFTN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1923 258 Pfam No apical meristem (NAM) protein 25 151 IPR003441 GO:0003677|GO:0006355
Lele05g1923 258 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 23 208 - -
Lele05g1923 258 Gene3D NAC domain 33 177 IPR036093 GO:0003677|GO:0006355
Lele05g1923 258 ProSiteProfiles NAC domain profile. 24 174 IPR003441 GO:0003677|GO:0006355
Lele05g1923 258 FunFam Nac domain-containing protein 86 33 177 - -
Lele05g1923 258 SUPERFAMILY NAC domain 19 175 IPR036093 GO:0003677|GO:0006355
Lele05g1923 258 MobiDBLite consensus disorder prediction 202 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1923 Lele-ChrLele05 13370206 13374855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1923 19 246 NAC Transcription Factor Family AT3G17730 75.732 4.43e-129 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele05g1923 NAM 1.4e-39 No_clan