Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1919 ATGGCAAGTGGAACTTATTTTCCCGGAAAATTCATATCGTGGTCGTGGAATCTGTTTCCTCAGGCAAAATCTGAGAATCAAATAGAGAGCACAATGTCGAACAACTGTGGCATAGCCAGTAACCGCCATCCAGATGGCAGCACAAAATCTGAAAATTTTGTTTGCAGGAAGGATATAACTACTACTGGAGACAATTTTACTCCCAAGGCAAGGAAACCATATACCATTACTAAACAAAGGGAAAAGTGGACGGAGGAAGAGCATCTGAAGTTCCTTGAAGCTTTGAAATTGTATGGCCGTGGTTGGCGTCAAATTGAAGAACATGTAGGTACCAAAACTGCAGTTCAGATTCGAAGCCATGCACAGAAGTTCTTCTCTAAGGTTGCGCGGGAATCTGAGGGCAGCACTGAAAGTTCTATAAAACCATTTGACATACCTCCTCCTCGGCCAAAAAGGAAGCCGTTGCATCCATATCCTCGCAAATCAGCTGACTCTTTCAAAGGACACTCAAATGAATCAGAAAGATCTCCATCTCCAAAGCTGTCAGCTACAGTGAAAGACACCCAATCTCCAACTTCAGTGTTATCCGCATTTGGTTCAGAAGCATTTGGATCAGTATTTTCTGAACAGACTAATAGATGTCCTTCCCCAAATTCCTGCACTACTGACATCCATTCGGTCAGTTTATCCCCAGTTGGAAAAGAAAATGATTGTATTACATCCAATTCATCAGAGGAGGAAGAGAAAGTATATTTAGCTTCAGTCCCATCAATTGCTGATTTGAAGCCAGATCTGTCCCTGAAGGTTGAGTTGACATCCGTGAAAAATGAGAATTATACTGGAGCTGCTGCCAACATGGCACATGTCACAAGCATTAAGCTTTTTGGAAGAACTGTCCCCTTGACAAAGAATCATAAGTCAGTTAATATAGAAGAGAAAATTCAGTCAGTTATATGTAAGGAGAACCCTTGCTCTGTTGTTGAGTCTGGATTTGACAATTCTTTGCCATGCTGGAATTTACGCCTAAGTCTTCCAGATTTAGACCTCGGGATGCGCAACAAAATTTTAAATCTTGCGCCCCTTCATCCCTCCCGCAAACAGAGAACGATTGAGAAGGAAAGTCATTGTATTGATTCAAACGCTGAATCAGCGAGTGAAATGGAAAATGGAGACAAGTTGGATGCTATAGATTCTCTATGCGAATCATCCCTCAAATCTCCTCGAGGGTTTGTACCATATAAAAGATGTTTAGCTGAGAGAGACATGAATAATGAGTTTGTTGATGGATTTGAAGAGAGGAAGGGACAACGAACTCGAGTGTGCTCGTAG 1329 0.4184 MASGTYFPGKFISWSWNLFPQAKSENQIESTMSNNCGIASNRHPDGSTKSENFVCRKDITTTGDNFTPKARKPYTITKQREKWTEEEHLKFLEALKLYGRGWRQIEEHVGTKTAVQIRSHAQKFFSKVARESEGSTESSIKPFDIPPPRPKRKPLHPYPRKSADSFKGHSNESERSPSPKLSATVKDTQSPTSVLSAFGSEAFGSVFSEQTNRCPSPNSCTTDIHSVSLSPVGKENDCITSNSSEEEEKVYLASVPSIADLKPDLSLKVELTSVKNENYTGAAANMAHVTSIKLFGRTVPLTKNHKSVNIEEKIQSVICKENPCSVVESGFDNSLPCWNLRLSLPDLDLGMRNKILNLAPLHPSRKQRTIEKESHCIDSNAESASEMENGDKLDAIDSLCESSLKSPRGFVPYKRCLAERDMNNEFVDGFEERKGQRTRVCS 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1919 442 MobiDBLite consensus disorder prediction 128 188 - -
Lele05g1919 442 ProSiteProfiles SANT domain profile. 78 129 IPR017884 -
Lele05g1919 442 SUPERFAMILY Homeodomain-like 74 129 IPR009057 -
Lele05g1919 442 SMART sant 79 127 IPR001005 -
Lele05g1919 442 PANTHER SWI/SNF COMPLEX-RELATED 41 353 - -
Lele05g1919 442 FunFam protein REVEILLE 6 isoform X1 82 130 - -
Lele05g1919 442 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Lele05g1919 442 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Lele05g1919 442 MobiDBLite consensus disorder prediction 146 174 - -
Lele05g1919 442 CDD SANT 82 125 IPR001005 -
Lele05g1919 442 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 78 127 IPR006447 GO:0003677
Lele05g1919 442 Gene3D - 82 129 - -
Lele05g1919 442 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 75 129 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1919 Lele-ChrLele05 13353534 13357292 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele05g1919 Myb_DNA-binding 1.5e-13 CL0123