Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1916 ATGGAGTACGGGAGTGGAGGCGGTGGTGGGTCCCCCGGGGACCACCATCACCATGGTCACCACCACGACGGTTCTGATTCCCAGAGGAACAAGCAGCGATACCATCGTCACACTGCTAACCAGATTCAGAGGCTTGAATCAATGTTCAAGGAGTGCCCCCACCCAGATGAAAAGCAGAGATTACAGTTAAGCAGAGAACTAGGCTTGGCCCCTAGGCAGATCAAGTTCTGGTTCCAGAACAGGAGAACCCAATTGAAGGCACAGCACGAGAGAGCCGATAACTGTGCCCTCCGAGCAGAGAACGACAAGATTCGTTGCGAGAACATAGCTATCAGAGAGGCCCTCAAAAATGTCATTTGTCCCTCTTGTGGTGGCCCTCCTCTTCACGAGGATTCCTATTTCGACGAGCAAAAGTTGCGTTTGGAGAATGCTCAATTGAAAGAAGAGCTTGATAGAGTATCTAGCATTGCGGCTAAATACATTGGAAGACCGATTTCTCAGCTCCCTCCGGTTCAGCCGATTCATATTTCGTCTCTGGACTTATCAATGGGAAGTTTTGGGAGCCAAACGATGATGGGTGGTGGTCCTTCTCTTGATCTTGATCTTCTTCCTGGGAGTTCGTCGTCGGTTCCGAGCTTGCCGTATCAGGCGGCGTCTTTTGCCGACATCGATAAGTCCCTCATGTCGGACATTGCCGGAAACGCCATGGATGAGTTGCTTAGGCTTTTGCAGACTAATGAACCCTTGTGGATGAAGTCGAGCACATATGGTAGAGATGTTCTTAATCTTGACGCTTACGGAAACGTGTTCCCCAGATCAAATGGTCACCTCAAGAACCCCAATGTTCGCGTCGAAGCTTCTCGAGATTCTGGAGTCGTCATTATGAATAGCTTGGCCTTGGTCGACATGTTTATGGACCCTAACAAGTGGATGGAGCTATTTCCGACAATAGTGTCAATGGCAACGACCATTAAAGTGATATCTTCTGGGATGCTTGGTGGTCATAGTGGTGCTTTGCAATTGATGTATGGAGAGCTTCAAGTGGTTTCTCCACTGGTTCCGACTCGAGAATTCTATTTTCTGCGATATTGTCAGCAAATTGAGCAAGGTTTATGGGTGATTGTGGATGTTTCTTATGATTTTCCTCAAGATAACCATTTTGCTCCTCAGTTTCGGTCTCATAGATTTCCTTCTGGTTGCTTGATACAAGATATGCCTAATGGGTATTCTAAGGTGACTTGGGTTGAACATGTAGAGATTGAAGATAAAACTCCAATTCATCGTCTTTACAGAAACCTTATTTACAGTGGCTTGGCTTTCGGAGCAGAAAGATGGCTCGCTACACTTCAAAGAATGTGTGAACGATTCGCTTGTTTAATGGTTACCGGCAATTCAACTCGCGATCTTGGAGGAGTGATTCCATCACCGGAGGGCAAGAGGAGCATGATGAAGCTCGCACAAAGGATGGTAACCAATTTCTGCGCAAGCATCGGTGCATCTAACGGCCATAGATGGACCACACTTTCTGGTTTTAACGAGGTCGGCGTTAGAGTGACCGTCCATAAGAGCTCCGATCCCGGCCAACCAAACGGCGTCGTTCTGAGCGCAGCCACCACCATCTGGCTCCCCATTCCTCCCCAGACCGTCTTCAATTTCTTCAAGGACGAAAGAAAAAGACCACAGTGGGATGTTCTTTCGAACGGAAATGCTGTGCAAGAGGTTGCTCATATAGCCAATGGGTCTCATCCTGGGAACTGCATATCTGTTCTTCGAGCGTTCAACACTAGTCAGAACAACATGCTGATACTGCAAGAGAGCTGCGTGGACTCATCGGGATCTCTGGTGGTGTATTGTCCGGTTGACCTTCCGGCGATCAACATCGCCATGAGCGGGGAGGACCCGTCATACATCCCGCTACTTCCTTCAGGGTTCACGGTGTCGCCGGACGGGCAAGTGGATCAAGGAGGTGAAGCGTCGAGCAGCTCGAGCACTGGAGGAGGAAGGAGATCAGGTGGGTCACTGATCACGGTGGCGTTTCAGATTCTGGTAAGCAGCCTGCCATCTGCGAAGCTGAACTTGGAGTCAGTGACGACGGTTAATAACCTCATCGGCACCACTGTGCAGCAAATTAAGGCAGCTTTGAATTGTCCTACGTCCTCCTGA 2163 0.4914 MEYGSGGGGGSPGDHHHHGHHHDGSDSQRNKQRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQLKAQHERADNCALRAENDKIRCENIAIREALKNVICPSCGGPPLHEDSYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMGSFGSQTMMGGGPSLDLDLLPGSSSSVPSLPYQAASFADIDKSLMSDIAGNAMDELLRLLQTNEPLWMKSSTYGRDVLNLDAYGNVFPRSNGHLKNPNVRVEASRDSGVVIMNSLALVDMFMDPNKWMELFPTIVSMATTIKVISSGMLGGHSGALQLMYGELQVVSPLVPTREFYFLRYCQQIEQGLWVIVDVSYDFPQDNHFAPQFRSHRFPSGCLIQDMPNGYSKVTWVEHVEIEDKTPIHRLYRNLIYSGLAFGAERWLATLQRMCERFACLMVTGNSTRDLGGVIPSPEGKRSMMKLAQRMVTNFCASIGASNGHRWTTLSGFNEVGVRVTVHKSSDPGQPNGVVLSAATTIWLPIPPQTVFNFFKDERKRPQWDVLSNGNAVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCVDSSGSLVVYCPVDLPAINIAMSGEDPSYIPLLPSGFTVSPDGQVDQGGEASSSSSTGGGRRSGGSLITVAFQILVSSLPSAKLNLESVTTVNNLIGTTVQQIKAALNCPTSS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1916 720 SUPERFAMILY Bet v1-like 476 711 - -
Lele05g1916 720 ProSitePatterns 'Homeobox' domain signature. 63 86 IPR017970 GO:0000981|GO:0006355
Lele05g1916 720 SMART START_1 230 455 IPR002913 GO:0008289
Lele05g1916 720 ProSiteProfiles 'Homeobox' domain profile. 28 88 IPR001356 GO:0003677
Lele05g1916 720 MobiDBLite consensus disorder prediction 1 37 - -
Lele05g1916 720 CDD homeodomain 31 89 IPR001356 GO:0003677
Lele05g1916 720 FunFam Homeobox-leucine zipper protein GLABRA 2 230 454 - -
Lele05g1916 720 CDD START_ArGLABRA2_like 225 454 - -
Lele05g1916 720 Pfam START domain 231 455 IPR002913 GO:0008289
Lele05g1916 720 SUPERFAMILY Homeodomain-like 11 88 IPR009057 -
Lele05g1916 720 Gene3D - 230 454 IPR023393 -
Lele05g1916 720 FunFam Homeobox-leucine zipper protein HDG1 18 104 - -
Lele05g1916 720 ProSiteProfiles START domain profile. 221 458 IPR002913 GO:0008289
Lele05g1916 720 SMART HOX_1 29 92 IPR001356 GO:0003677
Lele05g1916 720 Pfam Homeodomain 32 86 IPR001356 GO:0003677
Lele05g1916 720 MobiDBLite consensus disorder prediction 13 33 - -
Lele05g1916 720 Coils Coil 136 156 - -
Lele05g1916 720 MobiDBLite consensus disorder prediction 648 670 - -
Lele05g1916 720 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 29 715 IPR042160 -
Lele05g1916 720 Gene3D - 15 102 - -
Lele05g1916 720 SUPERFAMILY Bet v1-like 222 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1916 Lele-ChrLele05 13317634 13320833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1916 26 720 Homeobox Transcription Factor Family AT1G73360 68.706 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele05g1916 START 5.4e-52 CL0209