Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1914 ATGCCATGTCCAATTCCGACCCCCCGTTTTTCCTTTTTTCCTCCTTCTGTCCACACTGGTCATGCGGAACTCTTCAAAGTCTTCTCCTTTCAGTCAGCCTCAACCCCCATTTTGGGTTATTTCCTGTTTAGTGGCGCTTTCACCTTGCTTGCATACTTCCCTCCTCCTTCAGAGTTCTCTATCCCGTCAGGAGAATTTCGTCTTCGTTCCCGACATGGTCGCCTAGCTTCCTTGACTTTAAATGGGGAGATTCCGTCGCTGTCGGCTGTTGGTGAAGTTTTGAGAGTATATTGTCAGGAATTCAGCTTCACCACAGGTCTTTCTCTTTCTGGGGTTTCCATTTTCTTATACTTATCTTCATCTGCAGTCTCTTTTCTTGCTATTACTTGAGGCTTGCTTATTGAGTTTGAAGTTGTAGTTCAAAAAACCAATTTCTTGGGAAAGATGGTGGATTTGGAAAAAGATGAGGTGCCGATGCTGTTGGAGATAGAGGAACCATCAGTCGAATTTGTGGATTCTAAATTACGGAGGCTTATATCCAGGACACGAAGTGCATCGATGTCTATTCCCATGAGCTCCATGGAGCCACATGAGAGAGAAGCTAGTCTTGTGGGACATACTGGTCCACTAAGGAGTGAGAGGAAAACCCCATTTGTGCAGATGAGTGGTCCACTATATGTCACCAAAGGACATGGAAATCTTTTCCGACAGAACGTCAATGCCCAGGGGAACAAAGCATTGGAGAGCAGGACAGAAAAATTTGCTTTGCATGGAAGAGATGGTAATGATTGGCAGACCAACTATGCCCACAAAAATGAACACTTACTGAGGTCTGGGCAATTGGGAATGTGTAATGATCCTTATTGTACTACTTGCCCTACTTACTTCAAGACCTCTCAGCAAAGGAATCCTAAGGCTTCTGGTTTATTTGATCCCAAGTTCCACAATGCTCTCTATGGAGATGCTAAGGGTTGTGCAAGAAGATTTATTTCTTCTCTGTCTTCTTATGTCCCTGGAGTTATGAATCCTCATACTAAAGTTGTACAGCATTGGAACAAGTTTTTCGCCATTTCTTGCTTAGTGGCAATTTTTGTGGATCCATTATTTTTCTTTGTGCTAGGTGTAAACAAGGATGAAAGATGTATTTTCATAAACTGGAAGTTGACAGGAGCACTTGTTTTTGTTAGATCCATAAACGATTTTGTATACTTCCTAAACATGCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGACTCTAGGGTGGTTGGTGCTGGTGATTTAGTCGACCATCCAAAAAAGATTGCTCTCCATTATTTGAAGCGTTATTTTCTTATTGACTTATTTGTTGTATTTCCACTTCCTCAGATAATGATATTGGTTGCCCTACCACTTCACTTGGGTTCATCAGGAGCAAATTATGCTAAGAATCTTCTACGTCTAGCCATCCTTGTTCAGTATATTCCCAGATTGTGCAGGTTTCTGCCTCTTCTAATTGGTCAGTCTCCAAGTGGATTCATATTTGAGTCAGCATGGGCAAATTTTTTTATAAATCTTCTCACCTTTGTGCTATCTGGCCATGTTGTTGGGTCTTGCTGGTATCTCTTTGGTCTACAGAGGGTCAACCAATGTCTTCGAAATGCCTGCCATGGGGAGAAATTTGCTCACTGCATGCAATTGATTGATTGTGGGCATGGTCATATAGACACCTATCCGTCTTCTCTTTTGTTCAATGAAAGTCAAAGTTGGTTTGATAGTCCTGGTGCAGGGAGTTGTTTCGTAGTCTCAGATGACAACAAAGGTTTTCCATATGGAATCTATGCTAAAGCTGTTAACCTTGTTACAGAACCTAGTGTGGTCACCAGATATGTGTATTCACTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGGAATCAAATCCCGAGCTATTTTGTCTGGGAAGTCCTTTTTACAATGGCCATCATAGGACTGGGACTCTTGCTTTTTGCTCTTCTCATTGGAAATATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTAGAAATGTCACTTAGACGTCGTGATGTGGAGCAATGGATGAGCCACCGGCGCTTGCCAGAAGATTTAAGAAGGAGAATAATACTGGCTGAACGATATAATTGGGCTGCAACAAGAGGGGTAAATGAAGAAATACTTCTGGAGAGTTTGCCAGAGGATCTTCAGAGAGACATTAGACGCCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTCGCCCTGATGGATGAGCCTATCTTAGATGCCATTTGTGAGAGGCTAAGACAAAAAACATACATCAAAGGAAGCAATACTCTGTATCATGGTGGTCTGGTAGACAAAATGGTGTTTGTTGTGCGTGGAAGATTGGAGAGCATTGGAGATGATGGGATCAGCGTTCCCTTAGTTGAAGGAGATGTGTGTGGTGAAGAACTCCTGACATGGTGTCTTGAACATTGTTCTGTGAACAAAGACGGTAAAAAAGTAAGGCTTCCTGGACAGAGATTGCTCAGCACCAGGACTGTCCATTGCTTAACAAATGTGGAGGCATTTTCACTCCGATACGCAGACCTCGAAGAAGTCACTAGCCTTTTTACAAGATTCCTAAGAAACGCGCGCGTGCAAGGAGCCATAAGGTATGAATCGCCTTATTGGAGAAGCCTTGCAGCAACTCGCATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTCAGTCGTGCCGATACCTCACAATCAAATCTTTAG 2769 0.4283 MPCPIPTPRFSFFPPSVHTGHAELFKVFSFQSASTPILGYFLFSGAFTLLAYFPPPSEFSIPSGEFRLRSRHGRLASLTLNGEIPSLSAVGEVLRVYCQEFSFTTGLSLSGVSIFLYLSSSAVSFLAITXGLLIEFEVVVQKTNFLGKMVDLEKDEVPMLLEIEEPSVEFVDSKLRRLISRTRSASMSIPMSSMEPHEREASLVGHTGPLRSERKTPFVQMSGPLYVTKGHGNLFRQNVNAQGNKALESRTEKFALHGRDGNDWQTNYAHKNEHLLRSGQLGMCNDPYCTTCPTYFKTSQQRNPKASGLFDPKFHNALYGDAKGCARRFISSLSSYVPGVMNPHTKVVQHWNKFFAISCLVAIFVDPLFFFVLGVNKDERCIFINWKLTGALVFVRSINDFVYFLNMLLQFRLAYVAPDSRVVGAGDLVDHPKKIALHYLKRYFLIDLFVVFPLPQIMILVALPLHLGSSGANYAKNLLRLAILVQYIPRLCRFLPLLIGQSPSGFIFESAWANFFINLLTFVLSGHVVGSCWYLFGLQRVNQCLRNACHGEKFAHCMQLIDCGHGHIDTYPSSLLFNESQSWFDSPGAGSCFVVSDDNKGFPYGIYAKAVNLVTEPSVVTRYVYSLFWGFQQISTLAGNQIPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLPEDLRRRIILAERYNWAATRGVNEEILLESLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICERLRQKTYIKGSNTLYHGGLVDKMVFVVRGRLESIGDDGISVPLVEGDVCGEELLTWCLEHCSVNKDGKKVRLPGQRLLSTRTVHCLTNVEAFSLRYADLEEVTSLFTRFLRNARVQGAIRYESPYWRSLAATRIQVAWRYRKKRLSRADTSQSNL 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1914 922 Gene3D - 354 678 - -
Lele05g1914 922 Pfam Ion transport protein 351 681 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele05g1914 922 SUPERFAMILY cAMP-binding domain-like 681 877 IPR018490 -
Lele05g1914 922 SUPERFAMILY Voltage-gated potassium channels 343 682 - -
Lele05g1914 922 ProSiteProfiles cAMP/cGMP binding motif profile. 753 821 IPR000595 -
Lele05g1914 922 Gene3D Helix hairpin bin 681 745 - -
Lele05g1914 922 CDD CAP_ED 753 869 IPR000595 -
Lele05g1914 922 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 284 915 - -
Lele05g1914 922 Gene3D Jelly Rolls 751 875 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1914 Lele-ChrLele05 13274226 13284048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1914 153 831 Ion Channels AT3G17700 63.397 0.0 847