Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1908 ATGTCGATCACATCCACAGTCAGAGAACCAGAAACCCGAGAACACTTGAACTGCACTTTTGCCTCCAGATATGTGCGCACCTCAGTTCCCAAGTTTGAGATGCCGGATAATTCCATACCCAAGGATGCAGCGTATCAGATTATAAACGACGAGTTGATGCTGGACGGAGCACCCAGGCTCAACTTGGCTTCCTTCGTCACCACTTGGATGGAGCCTGAGGTTGACAAGCTAATCATGGCCTCACTTAACAAGAACTACGTTGACATGGACGAGTACCCTGTTACCACTGAGCTCCAGAATCGATGTGTGAATATGATAGCTCATCTGTTTCGTGCCCCTATTGGAGAAGATGAGGCTGCAGTGGGTGTGGGAACTGTGGGTTCATCAGAAGCAATCATGCTTGCAGGTCTTGCTTTTAAAAGAAAATGGCAGATGAAGAGAAAATCAGAAGGAAAACCATATGATAAACCCAACATAGTTACCGGAGCTAATGTTCAGGTTTGTTGGGAGAAATTTGCGAGGTACTTTGAGGTGGAGCTGAAGGAGGTGAAGCTAAGTGAGGGATGTTTTGTGATGGACCCAAAGAAAGCAGTGGAATTGGTGGATGAGAACACCATATGTGTTGCAGCAATACTGGGGTCAACTCTGACCGGAGAATTTGAGGATGTGAAGCTGTTGAATGAGCTTCTTACGGAGAAGAACATGGAGACAGGATGGGACACTCCAATTCATGTGGATGCTGCAAGTGGAGGGTTTATTGCTCCGTTCTTGTTCCCCGATCTCGAGTGGGATTTTCGGTTGCCTTTGGTGAAGAGTATTAATGTTAGTGGTCATAAGTATGGTCTTGTGTATCCTGGTGTTGGTTGGGTAGTCTGGAGGAGTAAGGATGACTTGCCTGATGATCTTGTCTTCCATATCAACTATCTTGGCACTGATCAGCCCACTTTCACACTCAATTTCTCCAAAGGCTCTAGTCAAATAATCGCTCAATATTATCAGTTCATTCGGCTTGGCTTCGAGGGTTACAAAAACATCATGGAGAACTGCATGGAGAGTGCAAGAGTATTGAAGGAAGGAATAGAGAGAACAGGCCGGTTCAACATTCTGTCAAAGGACATAGGAGTGCCACTGGTAGCCATATCTTTAAAAGACAGCAGCCAGCACACAGTGTTTGAGATATCAGACCATCTGAGGAGGTTTGGGTGGATTGTTCCGGCCTATTCAATGCCACCAGACGTGCAGCACGTAGCGGTGCTGCGTGTGGTCATCCGGGAGGACTTCAGCCGGAGCCTGGCAGAGAGACTCGTGTCCGACATTGAAAAGGTTGTTAAGCTCTTGGACACGCTTCCTAGCCCTCTGACCATTAAAGCTGCTCATGTCAGTGCCATAGCTAATGAGAGCGATCATCACAAGGTTAAGAAGAGTGACATGGAGATTCAAGCAGAGGTTGTAGCGTTGTGGAAGAGGCTCGTGGAAGGCAAGAGAACTGGAGCCTGCTAA 1500 0.472 MSITSTVREPETREHLNCTFASRYVRTSVPKFEMPDNSIPKDAAYQIINDELMLDGAPRLNLASFVTTWMEPEVDKLIMASLNKNYVDMDEYPVTTELQNRCVNMIAHLFRAPIGEDEAAVGVGTVGSSEAIMLAGLAFKRKWQMKRKSEGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGCFVMDPKKAVELVDENTICVAAILGSTLTGEFEDVKLLNELLTEKNMETGWDTPIHVDAASGGFIAPFLFPDLEWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKDDLPDDLVFHINYLGTDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMESARVLKEGIERTGRFNILSKDIGVPLVAISLKDSSQHTVFEISDHLRRFGWIVPAYSMPPDVQHVAVLRVVIREDFSRSLAERLVSDIEKVVKLLDTLPSPLTIKAAHVSAIANESDHHKVKKSDMEIQAEVVALWKRLVEGKRTGAC 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1908 499 PANTHER GLUTAMATE DECARBOXYLASE 1 499 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele05g1908 499 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 19 446 IPR010107 GO:0004351|GO:0006536|GO:0030170
Lele05g1908 499 Pfam Pyridoxal-dependent decarboxylase conserved domain 35 383 IPR002129 GO:0016830|GO:0019752|GO:0030170
Lele05g1908 499 SUPERFAMILY PLP-dependent transferases 15 445 IPR015424 -
Lele05g1908 499 CDD DOPA_deC_like 61 441 - -
Lele05g1908 499 Gene3D - 68 362 IPR015421 GO:0003824
Lele05g1908 499 FunFam Glutamate decarboxylase 68 362 - -
Lele05g1908 499 Gene3D - 363 450 - -
Lele05g1908 499 FunFam Glutamate decarboxylase 363 450 - -
Lele05g1908 499 FunFam Glutamate decarboxylase 8 67 - -
Lele05g1908 499 Gene3D - 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1908 Lele-ChrLele05 13194893 13198288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1908 11 499 Calmodulin-binding Proteins AT3G17760 77.642 0.0 801