Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1881 ATGCCTCAGAATAATAAGATTTGCAAAGAGCCGAATCTGATGCCTGACCTTTCTCTTCACATAAGCCTTCCGAACAGTGCTCCTTCTTCCATTTGCACTGGAAATAATAATAACGAAGAAGCAGATTCGTCGTTTGATATTTGGAGAAGCAGCAACACAGAAGAAGTAGATGGCGTAGTCATCAAATCCCACAGTGATAGTTCAATCAGAGGTAGTCCTCATCATCAAGAACAAAAAACCCATAATCTCTCTCTCTTCAATCATCATCATCTTCCCACAAGCACTACTGGTTTTGAGGCTGAGAGTCCCTGGAGGAGGACGACGGCGACAACCACAAACGTCGCAGGTGAAGATGGTGGGTTTTGGGTTTCAGAGGGACTCAATTCAAGACTCACCAGAGGAATCCCACTTCAGGATTATAACAATATTTCTGTATACCCACTTCATCATCAACAATTTCCCTATCCTAATAATTACTCAGCTTCTTCTCATCATCCTAGTTTTAGGCCCTGTGATAATAATAACAACACTGCTCTCGGCGGCGGCGGTGCTAATTATAATCCAATCTCGATGTTTAATGGGATAAGCATGGAGAGTTTGATAAGACCCCATCAACCCAATCATCATCATCAGTTTCCCTACTTGAATCATAATCAGTTTGGTTCAAACCCTGATTTCTCAAACGGATTGGGGAGGTTTTCGTCCAAGATGATGTTTCCTAATAGGATTCACGGTAATAAGAGGAACATGAGGGCTCCCAGAATGCGTTGGACCAGCTCTCTTCATGCTCGTTTTGTTCACGCCGTTGAGCTCCTTGGCGGCCATGAAAGAGCAACCCCTAAGTCAGTTTTGGAGCTCATGGATGTGAAAGATCTAACACTTGCTCATGTGAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCTGCAGCTTCCTCAGATGGAGATGAAGATTTCATGAGCCTAACACCTCCACCACTAAATGAAAATGAGTACTATTTTTCACCCAACAAGAGAGGCCCTACAAATGCATCATCTTTAGATCAGGATATGGCCTACACTAGCACCAGGCTGTGGGGTAATTCTTCTAGTAGACGAGCATGGACACAAGCTAGTTCCACAGATTTAGATGGAATTATACCACCTGATAATTTATCTTCTTCTCATCAGCACATTACTGAGAAACACTCCGAAGGAAATAATAATTTTTTGCAATCAAGAAGCTTAAAGGACTCTGAGAATTTATGCTTGGAGTTTACCCTAGGCAGATCAACGTGGGAAAGCAACGAACATGCCTAG 1311 0.4272 MPQNNKICKEPNLMPDLSLHISLPNSAPSSICTGNNNNEEADSSFDIWRSSNTEEVDGVVIKSHSDSSIRGSPHHQEQKTHNLSLFNHHHLPTSTTGFEAESPWRRTTATTTNVAGEDGGFWVSEGLNSRLTRGIPLQDYNNISVYPLHHQQFPYPNNYSASSHHPSFRPCDNNNNTALGGGGANYNPISMFNGISMESLIRPHQPNHHHQFPYLNHNQFGSNPDFSNGLGRFSSKMMFPNRIHGNKRNMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTPPPLNENEYYFSPNKRGPTNASSLDQDMAYTSTRLWGNSSSRRAWTQASSTDLDGIIPPDNLSSSHQHITEKHSEGNNNFLQSRSLKDSENLCLEFTLGRSTWESNEHA 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1881 436 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 14 435 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele05g1881 436 FunFam Myb family transcription factor 251 309 - -
Lele05g1881 436 Gene3D - 252 309 - -
Lele05g1881 436 SUPERFAMILY Homeodomain-like 250 307 IPR009057 -
Lele05g1881 436 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 253 306 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1881 Lele-ChrLele05 12929551 12936501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1881 247 430 G2-like Transcription Factor Family AT5G16560 55.789 3.27e-50 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele05g1881 None None None