Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1874 ATGGTTCTCTCTGTCTCCACTAACCTCAGAAAGCATCTCGTGGAAAAGGAAATGCTAACAAAGATCATGAGCTTCCATAGACGGAGCAGAAGAGCAGAAGAAGAAGACGACGACGATGAGGAAGAGGAAGAACAAGTTCGGACTTTGGGTTTATCTGTTAATCCCACTCATCTTTGCGCCAACTTCTTCATTCATCCCAATAATTGGTGGTACGTAGTGTGGAAGCATTTCATTCTGATATGGGCAGTGTACTCTTCCTTCTTCACTCCCATGGAGTTCGGCTTCTTCAGAGGGTTGCCCGAGGATATCTTCCTCCTCGACATTGCTGGCCAATTTGCTTTCCTCGTCGATATCGTCATCCGATTTTTCCTCTCCTATCGTGACACCTCCTCAAATACCTGGGTCTACGATCACCGTCAAATCGCCAAGAGGTATTTGAAGTCTCGGTTCATTCTTGATTTTCTGAGTTGTCTGCCCTGGGATTATATCTATAAGGCTGCTGGAAGGAAAGAGCCAGTGAGGTATCTTCTATGGATTAGGCTATGGCGAGCATGTAGAGTGATTGAATTTTTTGAGAAGCTGGAGAAAGATCTTAGGATCAATTACCAATGTACTAGGATTGTGAAACTTCTTGTTGTTGAAATCTATTGCACGCATACGGCTGCCTGCATCTTCTACTATCTTGCTACCACTTTGCCCCCCTCCAAGGAAGGTTATACATGGATAGGCAGCTTGACGATGGGTGACTACAGCTATTCGGACTTTAGACATATTAGTCTTTGGAGGCGTTATGTGACATCACTCTACTTTGCAATTGTTACCATGGTAACAGTTGGCTTTGGAGAAATTCATGCAGTCAATGTCAGGGAAATGATATTTGTCATGACATATGTTTCCTTTGACATGATTTTGGGTGCTTATCTTCTTGGTAACATTACAGCATTGGTCGTGAAAGGATCAAGGACAGAGAAGTTTAGGGACAAAATGTCTGAACTTAACAAGTACATGAATAAAAATAATTTGGACAAGCAGATAACTAAGGAGATTAGAGGGCATTTGCTGTTACAGTATGACCGCAATGACACTGAGGCTGCTATTGATGAAGATATTCCAGTTTCTATCCGCACAAAGATTTCGATGAATTTGTATGAGCAGTTCATTCAGAAAGTTCATCTTTTCAAGGGATGCTCTTCTGGGTTCATTAAACATGTTGCAATCAATGTCCATGAGGAGTTTTTTCTCCCAGGAGAAGTTGTTATGGAGCAAGGAGATGTAGTAGATCAACTTTACCTTGTATGCCATGGTGAGCTGGATGAGCTAAGAAAGGAAGATGATGGAAGAGAAGGGCTAGTTAAGCAAAATCAAACCTACAGTTCCTTTGGCGAGGTTTCCTTTCTTTGCAATTTGCCTCAACCTTACATGGTTATCGCTTGCGAATTTTGCAAAGTTCTGCGTCTAGATAAGCTATCCTTTACAGAAACACTCAAGACATACTTCTTAGATGGTCAGGTTATCTTGCAAAATCTTCTTGAGGGAAAAGACTCTGATCTTCAATATAAGCTTTTGGAATCAGACTTCACCCTGACAATTGGAAATCGTGAAACAGAACTGGCTATGAGGATTAATTGTGCTGCCTATGAGGGGAATTTCTATCTCTTGAAACATTGGGTTGAATCAGGACTAGATCCCAACAGAACTGATTATAATGGAAGATCACCTTTGCATATTTCTGCATCCAAAGGATATGTAGATATTGTTCGCTTTCTTATTGACAAACGAGTGAATATTGATTTATCAGACAAGTTCGGGAACACGCCCTTGTTTGAAGCCATAAAGAATGGGCATGAAGAAGTGGCTTCTTTACTTGTAAATAAGGGAGCTACTCTTACTATTAAAGATGCTGGAAGTTTTCTATGCATGACTGTTGCAACGAAGGAACTGGACCTTTTAAGAAAGCTTTTAGCATATGGTATAAATCCTAATTCTAGAAATTACGATCAACGAACAGCTCTTCACATAGCTGCCTCGGAGTGTTTGTTCGCAGTTGCTGAAATGCTCATAGAAGCAGGAGCAAGTGTTTTATCAACGGACAGGTGGGGATATACACCACTTGATGATGCTCGCATAGGGGGAAATAGGAGCATGATCAGATTGCTTGAAGTAGCAAAAATTTCTCAGCTGGCTGAGATATCAGATGGTATTCAGGAAGCACAAGAAACACTTCTCTCACCATCGAGAGACGGAAGTCCGAAAAAGAAATGCACGGTATTTCCTTTCCACCCATGGGATCACAAGAAGGATGTAAGAGTAGGAGCTGTGCTGTGGGTTCCTGGAAGCATTGAACGGCTAATAAAGATGGCAAGAGAACAATTAAAATCTCCCAATGGTTCCTGCATTTTATCTCAGCATGGTGGTAAAATTATTGATGTAGACATGATCAGCAATGATGAGCAGCTATTTCTATTAAGTGAACCGCACATTGAGGGCCAAAGAATAGAAGACAAGTGA 2508 0.4135 MVLSVSTNLRKHLVEKEMLTKIMSFHRRSRRAEEEDDDDEEEEEQVRTLGLSVNPTHLCANFFIHPNNWWYVVWKHFILIWAVYSSFFTPMEFGFFRGLPEDIFLLDIAGQFAFLVDIVIRFFLSYRDTSSNTWVYDHRQIAKRYLKSRFILDFLSCLPWDYIYKAAGRKEPVRYLLWIRLWRACRVIEFFEKLEKDLRINYQCTRIVKLLVVEIYCTHTAACIFYYLATTLPPSKEGYTWIGSLTMGDYSYSDFRHISLWRRYVTSLYFAIVTMVTVGFGEIHAVNVREMIFVMTYVSFDMILGAYLLGNITALVVKGSRTEKFRDKMSELNKYMNKNNLDKQITKEIRGHLLLQYDRNDTEAAIDEDIPVSIRTKISMNLYEQFIQKVHLFKGCSSGFIKHVAINVHEEFFLPGEVVMEQGDVVDQLYLVCHGELDELRKEDDGREGLVKQNQTYSSFGEVSFLCNLPQPYMVIACEFCKVLRLDKLSFTETLKTYFLDGQVILQNLLEGKDSDLQYKLLESDFTLTIGNRETELAMRINCAAYEGNFYLLKHWVESGLDPNRTDYNGRSPLHISASKGYVDIVRFLIDKRVNIDLSDKFGNTPLFEAIKNGHEEVASLLVNKGATLTIKDAGSFLCMTVATKELDLLRKLLAYGINPNSRNYDQRTALHIAASECLFAVAEMLIEAGASVLSTDRWGYTPLDDARIGGNRSMIRLLEVAKISQLAEISDGIQEAQETLLSPSRDGSPKKKCTVFPFHPWDHKKDVRVGAVLWVPGSIERLIKMAREQLKSPNGSCILSQHGGKIIDVDMISNDEQLFLLSEPHIEGQRIEDK 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1874 835 SUPERFAMILY Ankyrin repeat 539 719 IPR036770 -
Lele05g1874 835 Pfam Ankyrin repeats (3 copies) 543 633 IPR002110 GO:0005515
Lele05g1874 835 PRINTS EAG/ELK/ERG potassium channel family signature 216 226 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1874 835 PRINTS EAG/ELK/ERG potassium channel family signature 308 317 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1874 835 PRINTS EAG/ELK/ERG potassium channel family signature 107 117 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1874 835 PRINTS EAG/ELK/ERG potassium channel family signature 264 281 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele05g1874 835 PANTHER POTASSIUM CHANNEL AKT1 43 823 IPR045319 GO:0005249|GO:0006813
Lele05g1874 835 ProSiteProfiles Ankyrin repeat profile. 602 634 IPR002110 GO:0005515
Lele05g1874 835 Pfam Ion transport protein 73 314 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele05g1874 835 ProSiteProfiles Ankyrin repeat profile. 569 601 IPR002110 GO:0005515
Lele05g1874 835 SMART cnmp_10 392 510 IPR000595 -
Lele05g1874 835 ProSiteProfiles Ankyrin repeat profile. 666 698 IPR002110 GO:0005515
Lele05g1874 835 Pfam Cyclic nucleotide-binding domain 412 498 IPR000595 -
Lele05g1874 835 ProSiteProfiles Ankyrin repeat region circular profile. 602 633 - -
Lele05g1874 835 ProSiteProfiles Ankyrin repeat region circular profile. 666 698 - -
Lele05g1874 835 Gene3D Helix hairpin bin 320 380 - -
Lele05g1874 835 FunFam Potassium channel KAT2 380 516 - -
Lele05g1874 835 Gene3D Jelly Rolls 381 507 IPR014710 -
Lele05g1874 835 Gene3D - 538 721 IPR036770 -
Lele05g1874 835 ProSiteProfiles KHA domain profile. 753 835 IPR021789 -
Lele05g1874 835 FunFam Potassium channel SKOR 72 317 - -
Lele05g1874 835 Gene3D - 71 318 - -
Lele05g1874 835 SUPERFAMILY Voltage-gated potassium channels 66 317 - -
Lele05g1874 835 CDD CAP_ED 392 498 IPR000595 -
Lele05g1874 835 Pfam KHA, dimerisation domain of potassium ion channel 752 821 IPR021789 -
Lele05g1874 835 ProSiteProfiles Ankyrin repeat region circular profile. 569 601 - -
Lele05g1874 835 SMART ANK_2a 666 695 IPR002110 GO:0005515
Lele05g1874 835 SMART ANK_2a 569 598 IPR002110 GO:0005515
Lele05g1874 835 SMART ANK_2a 536 565 IPR002110 GO:0005515
Lele05g1874 835 SMART ANK_2a 699 728 IPR002110 GO:0005515
Lele05g1874 835 SMART ANK_2a 633 662 IPR002110 GO:0005515
Lele05g1874 835 SMART ANK_2a 602 631 IPR002110 GO:0005515
Lele05g1874 835 SUPERFAMILY cAMP-binding domain-like 320 510 IPR018490 -
Lele05g1874 835 Pfam Ankyrin repeats (many copies) 653 705 IPR002110 GO:0005515
Lele05g1874 835 ProSiteProfiles cAMP/cGMP binding motif profile. 392 495 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1874 Lele-ChrLele05 12861603 12868981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1874 27 698 Ion Channels AT5G37500 56.039 0.0 824