Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1872 ATGGATATGGAATCTGAGAGGCTTCATATTGCTGAGAACGATGAACAAGCTTCAGAAAAGGACGAGGTTCTCAAGAGAAGAATCTCTAGCCATCCTCTCTATGAACTCCTTGTTCAAGCTCACTTGCAGTGTTTGAAGGTAGGCGAAATTTCCAACTTGGAGAGAGCGCAGGAGGAGATAGATCAGAAGCTAATGATGAACAGGCAAAGCTGGGACATGTTCAGTGAACCAGAGCTTGATCTCTTCATGGAAGCATATTGCATGGCACTGGGGAAGCTTAAGGAAGCAATGGAGGAACCACAGCAAAAGGCGATGGCTTTCATAAACAACATGCATTCACAACTGAAGGAGCTCACTGTTAAGCCTGATGCGTCTTCCACAACTACTTCTGCTGCTCACTGCAATATTCTTCAAAATGATTGA 423 0.4444 MDMESERLHIAENDEQASEKDEVLKRRISSHPLYELLVQAHLQCLKVGEISNLERAQEEIDQKLMMNRQSWDMFSEPELDLFMEAYCMALGKLKEAMEEPQQKAMAFINNMHSQLKELTVKPDASSTTTSAAHCNILQND 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1872 140 MobiDBLite consensus disorder prediction 1 21 - -
Lele05g1872 140 Pfam KNOX1 domain 24 48 IPR005540 GO:0003677|GO:0005634
Lele05g1872 140 SMART KNOX2_2 69 120 IPR005541 GO:0003677|GO:0005634
Lele05g1872 140 SMART KNOX1_2 22 62 IPR005540 GO:0003677|GO:0005634
Lele05g1872 140 Pfam KNOX2 domain 75 119 IPR005541 GO:0003677|GO:0005634
Lele05g1872 140 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 12 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1872 Lele-ChrLele05 12837008 12838226 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1872 22 122 Homeobox Transcription Factor Family AT4G08150 37.736 1.23e-14 67.8