Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1863 ATGCATTCAATCCACAGTCCCTCTTTCTATGCTAATCTCAACAACTCTCTATCCAAGTTCAATCAAATTTCCCACTGTTTGGTTGGATCTAATGTGCTACTGGCCTCCTGCGCACCACCGGCTGCTGTTCGTAGCTTCGGATTGCGTGCTATTGATTCTGAATTCTTGCCCAAAATTGGTTTTTTTCAGAACCCATGTTTTGTTTTCGCGCGAAGGAAACTCAGGCGCTGTGTAGTAGCCAGAGCCACCGGAACTGACTACTATTCGACTTTGAAAGTTAGTAAGAATGCTTCTTTGCAAGAGATTAAGAGTGCTTACAGAAAACTAGCCCGTAAGTATCATCCAGATATGAACAAGAGCCCCGGGGCAGAAGAAAAATTCAAGGAGATAAGTGCTGCATATGAGGTTCTCTCAGATGATGAGAAAAGATCTTTATATGATCGCTTTGGTGAGGCAGGTCTACAAGGAGAAAATGGAGGGCCAGCTAGTGCTTCAGGGGTTGATCCTTTTGATGTATTTGATGCATTCTTTGGTGGTTCGGATGGCCTATTTGGAGGGGGTGATGGACCAGGAGGAATGAACTTCAATTTTAGGAGCAACAGGAAACGTGGTCTTGATATTCGGTATGACCTTTACTTGAGCTTTGAGGAATCTATTTTTGGAGGAAGGAAAGAAATCGAAGTTCCTTGTTTTCAGACATGTAATGATTGTGATGGTACAGGAGCTAAATCAAAGGATTGCATTAAACCATGCATAAATTGTGGTGGCAGAGGAGGAGAGATGAACAGTCAGAGAACACCCTTTGGAGTAATGTCTCAGGTCATAACCTGCTCTAAGTGCCGTGGTCTTGGCAAGATAGTCACTGAAAACTGTCAAAGGTGCAGTGGCAGTGGAATGGTGCAGTCTAAACAAACAATGGAAATGGCCATTCCTCCTGGTGTCATTGACGGAGCCACAATGCAAATTCGAGGAGAAGGGAATTTTGATAAGAACAGGGATACAGCTGGTGACCTCTATATAGTCATCCATGTAGGTGAAAAAGATGGAGTTTGGAGGGAAGGTCTTCACTTGTACTCAAAGATTAATATTGACTTCACAGAGGCAATCCTAGGGTCTGTTAAAAAGGTAGAAACTGTTGAGGGTTTAAGGGATCTCCAAATTCCTTCTGGGATTCAACCAGGAGATTCCGTGAAGTTGTCACGTATGGGAGTTCCTGACATGAATAAACCATCTGTTCGAGGTGATCATCACTTCATTGTGAATGTTCTCATCCCTAAAAGTATCAGTGTTGCTGAACGTGTACTTGTTGAGGAATTGGCTTCACTCAGAGCATCTGGCAAAGACACCTCATTTTCTTCTAACAAAATTGGGACACCTAAAGGTGGAGTAAATGATTTCAAAAAGAGGCACCCAAAACGCCATTCAAGCATGGGAAGCAAACATGGTTCTCTATGGAGATCAATCAAGAATTTCTTAAGGGGAGGACAATCTGAAGAGAAGTTTGCATCTATTAGCTTGGATTCCTCAGCAGCGTTGTGGAGTTTTAGCAAGCCAAACCCTAATTATTTTGTATTTGGTTTCATTACAAGTTGTATTATTTTCTATATATCTAGGTCATATTGCGCTTTGTTCGATAAACAAACCCTGCCCTCTACTCATAGAACACCTAGTGAAAGGACATTGAAAGGAAGAGATTTTTCTGTTTGA 1707 0.4212 MHSIHSPSFYANLNNSLSKFNQISHCLVGSNVLLASCAPPAAVRSFGLRAIDSEFLPKIGFFQNPCFVFARRKLRRCVVARATGTDYYSTLKVSKNASLQEIKSAYRKLARKYHPDMNKSPGAEEKFKEISAAYEVLSDDEKRSLYDRFGEAGLQGENGGPASASGVDPFDVFDAFFGGSDGLFGGGDGPGGMNFNFRSNRKRGLDIRYDLYLSFEESIFGGRKEIEVPCFQTCNDCDGTGAKSKDCIKPCINCGGRGGEMNSQRTPFGVMSQVITCSKCRGLGKIVTENCQRCSGSGMVQSKQTMEMAIPPGVIDGATMQIRGEGNFDKNRDTAGDLYIVIHVGEKDGVWREGLHLYSKINIDFTEAILGSVKKVETVEGLRDLQIPSGIQPGDSVKLSRMGVPDMNKPSVRGDHHFIVNVLIPKSISVAERVLVEELASLRASGKDTSFSSNKIGTPKGGVNDFKKRHPKRHSSMGSKHGSLWRSIKNFLRGGQSEEKFASISLDSSAALWSFSKPNPNYFVFGFITSCIIFYISRSYCALFDKQTLPSTHRTPSERTLKGRDFSV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1863 568 CDD DnaJ_C 206 428 - -
Lele05g1863 568 CDD DnaJ_zf 234 298 IPR001305 GO:0031072|GO:0051082
Lele05g1863 568 Pfam DnaJ central domain 234 298 IPR001305 GO:0031072|GO:0051082
Lele05g1863 568 PRINTS DnaJ domain signature 88 106 IPR001623 -
Lele05g1863 568 PRINTS DnaJ domain signature 106 121 IPR001623 -
Lele05g1863 568 PRINTS DnaJ domain signature 122 142 IPR001623 -
Lele05g1863 568 PRINTS DnaJ domain signature 142 161 IPR001623 -
Lele05g1863 568 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 50 444 - -
Lele05g1863 568 Gene3D DnaJ domain 83 185 IPR036869 -
Lele05g1863 568 Gene3D - 204 340 - -
Lele05g1863 568 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 221 301 IPR036410 -
Lele05g1863 568 Gene3D - 234 298 - -
Lele05g1863 568 ProSiteProfiles Zinc finger CR-type profile. 221 303 IPR001305 GO:0031072|GO:0051082
Lele05g1863 568 FunFam Chaperone protein dnaJ A6 chloroplastic 83 189 - -
Lele05g1863 568 Hamap Chaperone protein DnaJ [dnaJ]. 83 491 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Lele05g1863 568 FunFam Molecular chaperone DnaJ 226 303 - -
Lele05g1863 568 SUPERFAMILY HSP40/DnaJ peptide-binding domain 201 344 IPR008971 GO:0006457|GO:0051082
Lele05g1863 568 Pfam DnaJ domain 86 147 IPR001623 -
Lele05g1863 568 CDD DnaJ 86 139 IPR001623 -
Lele05g1863 568 ProSiteProfiles dnaJ domain profile. 86 150 IPR001623 -
Lele05g1863 568 SUPERFAMILY HSP40/DnaJ peptide-binding domain 352 433 IPR008971 GO:0006457|GO:0051082
Lele05g1863 568 ProSitePatterns Nt-dnaJ domain signature. 127 146 IPR018253 -
Lele05g1863 568 SMART dnaj_3 85 142 IPR001623 -
Lele05g1863 568 Pfam DnaJ C terminal domain 207 425 IPR002939 -
Lele05g1863 568 SUPERFAMILY Chaperone J-domain 81 193 IPR036869 -
Lele05g1863 568 Gene3D - 351 442 - -
Lele05g1863 568 MobiDBLite consensus disorder prediction 460 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1863 Lele-ChrLele05 12754960 12761217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1863 87 147 C2H2 Transcription Factor Family AT1G74250 44.776 8.11e-08 53.1