Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1858 ATGGAACGAGATTTTCTGGGTTTGAGTTCAAAGATTAGTTCGGCCACTAAAAAAGAGGATGCTACTGATAAAACAAACGAAGCGGTGAGGGGTTCAGGAATGCAGTGGTCGTTTTCAAACAAGGTTTCTGCTGTTCCTCAATTGTTGTCCTTTAAGACTTCTCCGGAAGATAGGACAAGAAAGACCACCTCATCAACTGATGCTTTTGACTCTAACCAGAAACCATTCATGGGTGTGATCCAGAAAAGTTTGAGCATGGGAAAACTAGTAGGAAATGAACGTGGAATGACAGTATACCCTATGCAACTAGTTGATACTATCTCAGGCTACCCTCAAGAAGCCAGAACATTTTCAGTCTCCAACCAATTAAATCAGAGGAGTCCTGTTCTCCAATCTCCTGTAAGTACCAATGTTCAGAACATGGTCAATTCTACCATAAAACCACACCCTCAAGCAGGAGTCCCTTTGATTGCCCCTGTATCTGTTCTTCCATCAAACGGTTCCATTGTTGGCACCACTGACTTAAGGAACTCGTTGAAACAGTCTGGCAAACCTTCTCAGCTGACCATTTTCTATAATGGTTCAGTGTGTGTCTATGAAGACATATCTCCTGAGAAGGCCCAGGCTATTATGTTATTGGCTGGAAATGGGAGTACTCCAAATCAAAATAAGGCAGTGTCAACAGCTCCATTGCAAACATCAAACTCCAAGCCATCTAAAGATGATGGGTTTATTGTAAGCCAATCCTACCATTCGCCTTTACTGAGCCCAATTCCCATGACCTTCCATGTCAGTTCTCCTAGCACCAATGAACCTGCAATTGTGAGACCAGTAGCATCTTCTGCTGCCCCAAGTAGCCACTTGGAGTCTCCTACTGTAGCTGCCCCTTCAAAATCTGCAGCCACAAAAATTGGTTCACCTGTGGACTTGCCTCAGGCACGCAAAGCATCCTTGGCTCGGTTCTTAGAGAAGCGCAAGGAAAGGGCGACAAGCACATCTCCATACTATAATATGAACAAGAAATCACCAGAATGTGGCAATCCAGGAACAGATAATATTAGTTTCTCCATCACTTCCACCGGTTACTGTCCCCTACCTGCCATGAACTAG 1110 0.4423 MERDFLGLSSKISSATKKEDATDKTNEAVRGSGMQWSFSNKVSAVPQLLSFKTSPEDRTRKTTSSTDAFDSNQKPFMGVIQKSLSMGKLVGNERGMTVYPMQLVDTISGYPQEARTFSVSNQLNQRSPVLQSPVSTNVQNMVNSTIKPHPQAGVPLIAPVSVLPSNGSIVGTTDLRNSLKQSGKPSQLTIFYNGSVCVYEDISPEKAQAIMLLAGNGSTPNQNKAVSTAPLQTSNSKPSKDDGFIVSQSYHSPLLSPIPMTFHVSSPSTNEPAIVRPVASSAAPSSHLESPTVAAPSKSAATKIGSPVDLPQARKASLARFLEKRKERATSTSPYYNMNKKSPECGNPGTDNISFSITSTGYCPLPAMN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1858 369 MobiDBLite consensus disorder prediction 283 299 - -
Lele05g1858 369 MobiDBLite consensus disorder prediction 219 239 - -
Lele05g1858 369 MobiDBLite consensus disorder prediction 278 308 - -
Lele05g1858 369 Pfam tify domain 184 215 IPR010399 -
Lele05g1858 369 SMART tify_2 181 216 IPR010399 -
Lele05g1858 369 MobiDBLite consensus disorder prediction 1 33 - -
Lele05g1858 369 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 30 343 IPR040390 -
Lele05g1858 369 Pfam Jas motif 311 336 IPR018467 -
Lele05g1858 369 ProSiteProfiles Tify domain profile. 181 216 IPR010399 -
Lele05g1858 369 MobiDBLite consensus disorder prediction 324 351 - -
Lele05g1858 369 MobiDBLite consensus disorder prediction 331 351 - -
Lele05g1858 369 MobiDBLite consensus disorder prediction 51 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1858 Lele-ChrLele05 12698161 12701890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1858 34 345 Tify Gene Family AT3G17860 38.571 1.24e-45 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele05g1858 tify 4.7e-18 No_clan