Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele05g1846 | ATGGCGGACGCACCTGCTGAACCTGACCTTCCTCACTTGGACCAAATGCTTGGCCTTCTCAGGATTCACATCAAGCGTGGTATCAATCTCGCTGTTCGTGATGTTCGCAGCAGCGATCCTTACATCGTCATCAGGATGGGCAAGCAGACCTTTTTCTGTTGTAGACCCGAAGCTTCCGGTAACATTGGTGAGGTTATTGTCCTTACTGAGCTAAGTCCTGGTACTGTGTATGACCATGATACTTGGAGCCCAGATGACCCGATGGGAGATGCGGAGTTTGATATAATTCCATTTCTAGAAGCCAAGCAGGCAAAACTGCCTAGCAGAGGAAAGCTGCGTTCTTTTTAA | 348 | 0.4856 | MADAPAEPDLPHLDQMLGLLRIHIKRGINLAVRDVRSSDPYIVIRMGKQTFFCCRPEASGNIGEVIVLTELSPGTVYDHDTWSPDDPMGDAEFDIIPFLEAKQAKLPSRGKLRSF | 115 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele05g1846 | 115 | Gene3D | C2 domain | 11 | 106 | IPR035892 | - | |
| Lele05g1846 | 115 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 15 | 106 | IPR044562 | - | |
| Lele05g1846 | 115 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 14 | 103 | IPR035892 | - | |
| Lele05g1846 | 115 | Pfam | C2 domain | 18 | 50 | IPR000008 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele05g1846 | Lele-ChrLele05 | 12559400 | 12561319 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele05g1846 | 15 | 104 | C2H2 Transcription Factor Family | AT4G05330 | 40.206 | 1.63e-16 | 71.6 |