Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1835 ATGAAGAACATTCTCAAGAAGCTTCATATTATGCCCCATCAATCAGAAGATACTGAAGGGTCTACTTCATCAAGGGGAAACAAGTCCAACGATAGTCCATCCCCTAAGAAGCTTTCTCACTCACGTTTTCCTCAAGTTCCTGATAATAAACCCTTTTCAGGGCTTTCGAATTGGTTGCATGCAGTTTCTAATAAGCAGAGTCCTGGTTCTCCATCTTCGAACCTCACAAGAGGAGAGAGAATGGAACCGTCTGATTCAATGAGCAGTGGTGGTCTGGATACTGTTTCTGATTCTGCAAGGTGTGATACAACTTCTAGCACTTCGAAGGATCCTGAAATAGAGGAAGAGTATCAGATTCAACTGGCTTTAGAGTTGAGTGCAAAGGAGGATCCTGAGGCTGTTCAAATTGAAGCTATTAAGCAAATCAGTTTAGGTTCTTGTGACCCTGACAACACACCAGCTGAAGTTGTGGCCTATCGATACTGGAATTATAATGCTCTTGGATATGATGACAAGATTTTAGATGGTTTCTATGATCTTTATGGGATCTTGACTGGCTCGGCCTCTGCAAGAATGCCTTCCCTCATAGATCTGCAGGGAACATCAATCTCAGATGGTGTCGCATGGGAAGCAGTCTTAGTCAATAGAGCTGCAGATTATAATTTGTTAAAACTTGAGCAAAAAGCCCTAGAGCTAGCAAGAAAGTCAAGATCAGATATTGAAGTAGTAGTAATTAGCAATTTGGTGAAAAAGCTTGCCATATTAGTGGCTGACTATATGGGTGGACCAGTTTCAGATCCTCAACATATGAAAAGTGCATGGCAGAGTCTTAGTTATAGTCTGAAATCAACCCTTGGTAGCATGGTTTTGCCACTTGGTTCGCTGACCATTGGATTGGCTCGGCACCGTGCATTGTTATTTAAGGCTTTAGCTGATTGTGTGGGTGTTCCATGTCGGTTGGTCAAAGGACAGCAATATACGGGTTCTGATGATGTGGCAATGAACTTTATCAGGATTGGTGATGGAAGGGAGTACATCGTCGACCTAATGGCTGATCCTGGAACACTTATTCCAGCTGATGCAACTGGATCGCATATTGAGTATAATGAATCAATATTTTTGGCCATTCCTTCGACAGGAGACCTTGATTCCTCTCAGGTGCCATTGTCCAGCAGAGGCATTGGAAGTTCAATAGAAGAACCTTCAGACTCTGGGGAGTTGGACAATTCAAACAAATCAAAACAGTTTGCCTCTGTTGGATCTGACAAAAGCAGGCCTGCTCCTGTCAAGGAAGAACCAAAGAGACCGTCGTATACCCTCGATGTTGAGAAGATTGCGCTGGAAACTCCTGGTCGGCCTAATTATACACATGGACATGCAAGATCACCTTCTTGGACAGAAGGGATCAGTTCCCCTGCAGTTCATAGAAGGAAGGTTAAGGATGTTTCACAATATATGATGGATGCTGCCAAAGATAATCCTAACTTGGCTCAAAAGCTTCATGATGTTTTACTTGAAAGCGGCGTCGTTGCTCCTCCAAACTTATTTTCTGAGATTTATAATGAGCAACTTGGTTCCCCATCCCTGAGTGAAGAAAAAGATGAACTTAAACAGGGGATTGTCCAGCAAGAAACTAAGGTTGCTGATAATTTAGGTCCTTCTCAAATTTTTCCTCCTTTGGCTCACTACAGAATCCATTCCAAAGCAAGCACTAGCAGTCAGCTGGAGCATTCTAAACCTGTAGAAGGTTTAGGGACCAACCTTACTCTTGATACAAAGGAAGTGGCTGGTCCATCACAAGAAGGTAGTCCTGTGAAATACGGGAAAAATGTGCCGGTTGCTGCAGCTGCAGCGGCAGCAGCTGCTGTCGTTGCATCTTCCATGGTAGTTGCCGTGGCAAAGTCAAGCACCAACTCAAGGATTGAGCTTCCTGTAGCAGCTGCTGCAACTGCTACTGCTGCAGCTGTTGTTGCATCCACTGCAGCTGTCAGTAAACAGTATGAGCAGGGCAGTCGGAGCGATGGAGATACAGATGCTGGTTATGAGCCAAAGGGCAGCGGGGATGGAGAGCATGGTACTTTAGGAGAAAACTCAGAAGGCGAGAGAAGATCTGATAAATCAGTAGGTAATGAAAGCACAAAATCTGATTCTGCTCTAGATGATGTTGCTGAGTATGAGATTCCATGGGAGGAAATGGTGCTGGGTGACCGCATCGGACTTGGGTCATACGGGGAGGTGTACCATGGGGAATGGAGAGGAACTGAAGTTGCTGTAAAAAGGTTTCTAGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTTCAAATAATGAAAAGACTGAGGCACCCAAATGTTGTTCTCTTCATGGGAGCTGTAATTCGACCTCCGAATCTGTCAATCGTTACGGAATTTCTTCCCAGAGGCAGTTTGTATAGATTAATTCACCGTCCTAACAGCCAACTAGATGAGCGAAGGCGATTGAGGATGGCCCTCGATGCTGCTAGAGGAATGAATTATTTGCACAACTGCTCTCCAATGATAGTCCACCGTGATTTGAAGTCCCCAAATCTTCTCGTTGATAAAAACTGGGTTGTGAAGGTTTGTGATTTTGGGTTATCACGGATGAAGCATAGTACATTCCTCTCTTCCCGATCAACTGCTGGGACTGCAGAGTGGATGGCTCCAGAAGTGTTGCGAAATGAACCTTCAAATGAAAAGTGTGATGTTTATAGCTTTGGGGTCATATTATGGGAGCTGTTGACTCTGCAGCAGCCATGGGGAGGGATGAATCCGATGCAAGTTGTCGGTGCTGTGGGTTTCCAACATCGCCGTCTTGACATTCCTGACAACATGGACCCTGCTGTCGCTGATATTATCAGGCAATGCTGGCAGACAGATCCAAAGCTGAGACCAACATTTGCTGAGATCATGGCCGCTCTGAGGCCATTACAGAAGTCGATTGTGAGTTCTCATGTGGTGAGGTCTGGTGCACGGTTAAAGACAGTTGTAGAAGATGCAGCAGGATAA 3039 0.4472 MKNILKKLHIMPHQSEDTEGSTSSRGNKSNDSPSPKKLSHSRFPQVPDNKPFSGLSNWLHAVSNKQSPGSPSSNLTRGERMEPSDSMSSGGLDTVSDSARCDTTSSTSKDPEIEEEYQIQLALELSAKEDPEAVQIEAIKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGILTGSASARMPSLIDLQGTSISDGVAWEAVLVNRAADYNLLKLEQKALELARKSRSDIEVVVISNLVKKLAILVADYMGGPVSDPQHMKSAWQSLSYSLKSTLGSMVLPLGSLTIGLARHRALLFKALADCVGVPCRLVKGQQYTGSDDVAMNFIRIGDGREYIVDLMADPGTLIPADATGSHIEYNESIFLAIPSTGDLDSSQVPLSSRGIGSSIEEPSDSGELDNSNKSKQFASVGSDKSRPAPVKEEPKRPSYTLDVEKIALETPGRPNYTHGHARSPSWTEGISSPAVHRRKVKDVSQYMMDAAKDNPNLAQKLHDVLLESGVVAPPNLFSEIYNEQLGSPSLSEEKDELKQGIVQQETKVADNLGPSQIFPPLAHYRIHSKASTSSQLEHSKPVEGLGTNLTLDTKEVAGPSQEGSPVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSSTNSRIELPVAAAATATAAAVVASTAAVSKQYEQGSRSDGDTDAGYEPKGSGDGEHGTLGENSEGERRSDKSVGNESTKSDSALDDVAEYEIPWEEMVLGDRIGLGSYGEVYHGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVIRPPNLSIVTEFLPRGSLYRLIHRPNSQLDERRRLRMALDAARGMNYLHNCSPMIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELLTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNMDPAVADIIRQCWQTDPKLRPTFAEIMAALRPLQKSIVSSHVVRSGARLKTVVEDAAG 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1835 1012 FunFam Serine/threonine-protein kinase CTR1 811 994 - -
Lele05g1835 1012 CDD STKc_MAP3K-like 738 984 - -
Lele05g1835 1012 SUPERFAMILY Protein kinase-like (PK-like) 717 983 IPR011009 -
Lele05g1835 1012 MobiDBLite consensus disorder prediction 50 106 - -
Lele05g1835 1012 MobiDBLite consensus disorder prediction 694 710 - -
Lele05g1835 1012 MobiDBLite consensus disorder prediction 671 685 - -
Lele05g1835 1012 MobiDBLite consensus disorder prediction 449 468 - -
Lele05g1835 1012 Pfam Ethylene-responsive protein kinase Le-CTR1 154 357 - -
Lele05g1835 1012 FunFam Serine/threonine-protein kinase isoform 1 723 810 - -
Lele05g1835 1012 SMART serkin_6 732 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1835 1012 ProSitePatterns Serine/Threonine protein kinases active-site signature. 851 863 IPR008271 GO:0004672|GO:0006468
Lele05g1835 1012 MobiDBLite consensus disorder prediction 15 39 - -
Lele05g1835 1012 MobiDBLite consensus disorder prediction 384 420 - -
Lele05g1835 1012 MobiDBLite consensus disorder prediction 384 440 - -
Lele05g1835 1012 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 107 989 - -
Lele05g1835 1012 MobiDBLite consensus disorder prediction 665 719 - -
Lele05g1835 1012 Gene3D Phosphorylase Kinase; domain 1 725 809 - -
Lele05g1835 1012 MobiDBLite consensus disorder prediction 425 440 - -
Lele05g1835 1012 Pfam Protein tyrosine and serine/threonine kinase 734 984 IPR001245 GO:0004672|GO:0006468
Lele05g1835 1012 ProSiteProfiles Protein kinase domain profile. 732 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1835 1012 Gene3D Transferase(Phosphotransferase) domain 1 811 997 - -
Lele05g1835 1012 MobiDBLite consensus disorder prediction 1 115 - -
Lele05g1835 1012 ProSitePatterns Protein kinases ATP-binding region signature. 738 759 IPR017441 GO:0005524
Lele05g1835 1012 PRINTS Tyrosine kinase catalytic domain signature 845 863 IPR001245 GO:0004672|GO:0006468
Lele05g1835 1012 PRINTS Tyrosine kinase catalytic domain signature 955 977 IPR001245 GO:0004672|GO:0006468
Lele05g1835 1012 PRINTS Tyrosine kinase catalytic domain signature 911 933 IPR001245 GO:0004672|GO:0006468
Lele05g1835 1012 PRINTS Tyrosine kinase catalytic domain signature 806 819 IPR001245 GO:0004672|GO:0006468
Lele05g1835 1012 PRINTS Tyrosine kinase catalytic domain signature 892 902 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1835 Lele-ChrLele05 12441628 12448967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1835 1 998 MAP Kinase Kinase Kinase AT1G73660 63.091 0.0 1155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Lele05g1835 PK_Tyr_Ser-Thr 1.8e-67 CL0016