Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1833 ATGGGTGGTGGAACGATACTGGTGGACGGGATTCGTCGCCTTTTTCAACGTCGACCTTCTTCTGCGATCAAGTCATCTGATGTCGATCCTAGTCACGATCATAACTATTACAATGCCGATCGTAGTGCAAATAGCAACCATACCCACAAGTTCGTGAGAGATTTGCGCGCTCAATTAGCCACTATTCCCAAACAGGAGAGAGAAGAAGGCGAGGGGGCCGAGGACGGGCTCACGATAGAGGAAGATTTTGATATCCTTGGCTTGAAGCATATCAAGGTTCCCACACGGGCGTACTTCAAAGTTGCTTCCATGGATCCTTCAAAAAAGGGCACATCGGAAACAGAGTTCTTCACTGAGTATGGAGAGGCCAGTCGATATCAGGTCCAAGAAGTTATTGGAAAAGGAAGTTACGGTGTCGTAGGTTCTGCAATTGATACTCATACAGGGGAGAAGGTTGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTCTCAGATGCCACACGGATCCTAAGAGAAATTAAACTCCTTCGGTTGCTCCGACATTCTGATATAGTAGAAATCAAGCATATAATGCTTCCTCCTTCACGGCGAGAGTTCAAGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATCAAGGCTAATGATGATCTTACACCTGAGCACCATCAATTTTTCTTGTACCAACTTCTTCGGGGCCTGAAATATATACATTCTGCAAATGTGTTTCATCGTGACTTAAAGCCCAAAAATATTCTTGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGGCTTGCTCGAGTTTCCTTTAATGATGCACCTTCTGCTATATTCTGGACTGACTATATTGCAACTCGGTGGTATCGTGCGCCAGAATTATGCGGTTCTTTTTTCTCAAAATATACCCCTGCAATTGATATTTGGAGCATCGGATGCATATTTGCAGAAATGCTCTCTGGGAAGCCATTGTTTCCCGGTAAAAACGTGGTGCATCAATTGGATCTCATGACTGATTTACTTGGTACTCCTCCTGCTGAAACCATTTCGAGGATACGTAATGAGAAAGCTAGAAGGTACCTTAATAACATGCGGAAAAAGCAACCAGTTCCACTTTCTCAAAAGTTCCCTTATGCGGATCCCTTGGCTCTTCGTCTACTGGAGCGCCTGCTTGCGTTCGATCCTAAAGATCGTCCTTCAGCTGAAGAGGCATTAAGTGATCCTTACTTTCGTGGTTTGGCAAATGCTGAGCGTGAACCAGCATCTTCTCAACCGATTTCAAAACTTGAGTTTGAATTTGAGAGAAGAAAATTGGCTAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTCTAGAGTATCATCCTCAAATGCTCCAGGAATATCTTCGTGGTGGAGATCAGACCGGCTTCATGTATCCGAGTGGGGTTGATCGGTTCAAGAGACAGTTTGCACATCTTGAGGAGCACTATGGAAAAGGTGATAGAAGCACTCCTTTGCAGAGACAGCATGCCTCCTTGCCTAGAGAACGAGTACCTGCTCTCAAGGATGAAGCCAGTCAAAACGATGACTTTGAAAGGGGAACTGGTGTGGCTGCTGCTACAACTCTTCACAGTCCTGATGGGACTGAACAAAATGAACCAAACCAAGGTACACGGAGCCTGTTGAAGAGTGCCAGCATCAGTGCCTCCAAGTGTGTAGGTGAAAAACCAAGTAAAGATTCAGAGGGGGAGCCTATTGAAGAGATGAATGATGAGCAAGTAGATGAGTTGTCAGAGAAGCTTGATGCCGTTCGTGCTTAG 1824 0.4408 MGGGTILVDGIRRLFQRRPSSAIKSSDVDPSHDHNYYNADRSANSNHTHKFVRDLRAQLATIPKQEREEGEGAEDGLTIEEDFDILGLKHIKVPTRAYFKVASMDPSKKGTSETEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHSDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYIATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAETISRIRNEKARRYLNNMRKKQPVPLSQKFPYADPLALRLLERLLAFDPKDRPSAEEALSDPYFRGLANAEREPASSQPISKLEFEFERRKLAKDDVRELIYREILEYHPQMLQEYLRGGDQTGFMYPSGVDRFKRQFAHLEEHYGKGDRSTPLQRQHASLPRERVPALKDEASQNDDFERGTGVAAATTLHSPDGTEQNEPNQGTRSLLKSASISASKCVGEKPSKDSEGEPIEEMNDEQVDELSEKLDAVRA 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1833 607 Gene3D Transferase(Phosphotransferase) domain 1 212 441 - -
Lele05g1833 607 FunFam Mitogen-activated protein kinase 212 441 - -
Lele05g1833 607 Gene3D Phosphorylase Kinase; domain 1 142 464 - -
Lele05g1833 607 ProSitePatterns MAP kinase signature. 161 264 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele05g1833 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 120 470 - -
Lele05g1833 607 ProSiteProfiles Protein kinase domain profile. 126 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1833 607 MobiDBLite consensus disorder prediction 516 531 - -
Lele05g1833 607 ProSitePatterns Protein kinases ATP-binding region signature. 132 156 IPR017441 GO:0005524
Lele05g1833 607 MobiDBLite consensus disorder prediction 22 43 - -
Lele05g1833 607 MobiDBLite consensus disorder prediction 497 607 - -
Lele05g1833 607 Pfam Protein kinase domain 126 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1833 607 SUPERFAMILY Protein kinase-like (PK-like) 122 422 IPR011009 -
Lele05g1833 607 FunFam Mitogen-activated protein kinase 115 220 - -
Lele05g1833 607 FunFam Mitogen-activated protein kinase 442 464 - -
Lele05g1833 607 SMART serkin_6 126 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele05g1833 607 MobiDBLite consensus disorder prediction 543 568 - -
Lele05g1833 607 CDD STKc_TDY_MAPK 125 463 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1833 Lele-ChrLele05 12389950 12395548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1833 1 595 MAP Kinase Gene Family AT1G73670 69.307 0.0 828
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Lele05g1833 Pkinase 9e-68 CL0016