Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1820 ATGGCTCCTCGTGCCGACGAATACGACAAAGGTGAGGTCTCCTCCAGCGAAGACGATGACGGCTTCCATCAGGACATGGAATCCCTCCGACGAGCCTGCATGATCGCCGGCACTAAGCACGATAATCTTAAACCCACTTCTACCGTCGCTCCCGACGATCAGAATGCAGACGCAGTGGTTCCGAAAGCACCTGACCCGCTTTTGGGCCCCGGCGATGCCCTCGTCCCCGTGTCTGACTCGGATGACGACCAGAGTGACCTTCAGTATCTTCATAGAGTACAGGAGCTTTACCAGCCTTCGTCTCTCCAGCCATTGAAAATTCTTCCGGCGCTTTCTTTGTCTGATGATGAAGAAGACGACGTGGAACTCGCCCGGGTCATTATGAAACGTTTTTCTGCTTATAAAAGAGGCCCTGATGAAGATAATGTGGATAAAACGGCTGAGGAAGCTCATACCTCAGGTCTAGGCTCTGAGCAGGAATTTGATAACAGCATGACATCTAAGGGATTAGATCCAGGTGAATCATGCCCTGTTTCTCAGGATGCTATTGAGACCACCATTTTACTCACTGGTGCTATTGAGAGACATCCTTTTAACATCAATGAGAGGTGTAAACCCGAAGCTTGCAAGTCATCCAAGTTACCGGCCAAAAGATCAAAATTTCCTTTGTCTGCTCAAGTTTTTATTGATGCAATAAAAAAGAATAGATCTTTCCAGAGGTTACTTAGAAGTAAGTTGATTCATATGGAAGCAATAATTCAAGAAAACAAACAGTTGAGGGAAAGAGTTAAACTTCTTAAAGAATTTCAGATTAATGATAAAAAAATATCTCCGATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTAAATATAGGATGGTGTTGGAACGATCTCCATTCTCATTGGATCTGAAAAAGTGGTCTAATGTGGAGAGGGAGAATCTTGCTAAGGGAATAAAGCAACAATTTCAAGAACTGGTGCTTCAAATGTCAATAAATCAAGACAATTCAGAGTGGTTGTGTGGATATGCGAATAACTTTGATAGCATACTTGCATCTATTAAAGATCTTGAGATTACGCCTGAGAACATTAGAAAGTTTCTGCCTGAATTCAATTGGGATCAGTTGGCTTCCAAGTATGTTGTTGGTCGTACTGGTGCAGAATGTGAAGCAAGAAAGTCTTTCTCCTCAAGCATTGCAGGCATCTATGATGATACCATCACAGACAGTTTGTCACTTTTGGGTGTCAATAAGAGTGCAAGATCAACATGGAAGAAGTCCCTCTGTCCTGATAGGAAAGGGAGCTTTACTGTAGAAGAAGATGAGGGCTTAATAGTGGCTGTCCATCTCTTTGGACGGAAATGGAATCAGATAGCTAGATTTGTTCCGGGCCGGACCCAAGCTCAATGTAGAGACAGGTACGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGATGGACTAAGGAAGAAGATTCGAGATTGAAAACAGCAATTGCCAAATATGGATTCTGCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGCCAATGCAGGAAGAGGTGGCGGGTTCTATTTCCTGACCAAGTTCCTATGCTTCAAGCAGCTAGAAAGATGAAAAAATCTGCTCTGATCAGTAACTTTGTTGATCGAGAGTCTGAACGGCCTTGCCTTTCTTTAAATGATTTTCTTCCTTTGGCACTGTTAGATCCACCATCTGATCCAGATGCTGTGAACCTCCCTCAGAAGAGGAAGAATATGTCCAGCGATACTTCTGAGAAAAAGAGGCCACAAAAACGCATAAAAAAGGCTCAAAGTTGTCTCAAGAAAGCACAAGCTGAGGAGGTTGAGCCTTGTAGTGGACACGGTGCCAACAAGCCAAAGATTACTGAACCACATTTGGAGGACAACTCTGTTGAAGCTATGCATGATCACTCCCCACTGGACTTGGTTGTGACAACAACGAATGGCCAAGGGGATTTAGGTGAACATAATAATATCGATAAGCTAATTGAGTCAAATCAAATGTGGGAGGGTTTTAATGAATTAGATGATGAGAGCCGTCCTTGTATAACACCTTGTGAGAATCCAGAAGCAGGGACAACAGATGGGCATTGTGAGGAAATTTCTTCTATGAACTCATTGAAACGCCAAACTGGAAGAAAGTCAATGCTATCTGCAAGTATATCTGATAGTGCAGCTGTAGGTAGCAAGGTTGCCAGAAATACTACTTCAAAGAAGGAAAGAAAGAAGAAAGGGAAACACAACAAAATGGTTAGAAGTGTTCAAACAACAGAGGACCACCTGTTTAAGAATAAAATGTCAAAACCTGGAAGCCTATCTTCTATGCAGATTTTAGAAGGTCAGGATGAAGACAATATAACTCTTGCTAGATTTGTACGCAATGTATCGAACAAACGTTTTAAAAATATGGATCAAATGACTCAGGCTGCTTCCTATGCTAGCTGGTCCATTAAAAAATCATGTAGATCTGGTCGAGCTGCCAAACAAACTCGTGATTACCTGCCTTTCAGTTTGAAAAAGGGACATGAATTGCTTTCTGAAGAAGTACACAACGGTCATGACCACAACCAAGAAACGTTGGTCATGCAAGATAAGTTAAATAAAGATTGTATTGATGTTACACCTGGGACTCTGGTGGTCCAGAATCATTCTCTCAATTTTAAGAACATGTCAATCAGTGAAGCTGATGACAATGGGAAGGCAATGTCAGGGCCAGTTGATGAGCAGACTATGTTTTTGGATGGGTTGACAGAACCCAAAAACATCAATGTTGGAGAAGATGTGCCTACTGATGCTCCCCTTGCTTCATTCCTGAAAAAGAAGAAACGCAAGGGCAAGGCAATGGCAGAACCAGTTGATGAGTTGGCTATAGTTTCAAATGGTTTGAAAGCATGA 2931 0.4272 MAPRADEYDKGEVSSSEDDDGFHQDMESLRRACMIAGTKHDNLKPTSTVAPDDQNADAVVPKAPDPLLGPGDALVPVSDSDDDQSDLQYLHRVQELYQPSSLQPLKILPALSLSDDEEDDVELARVIMKRFSAYKRGPDEDNVDKTAEEAHTSGLGSEQEFDNSMTSKGLDPGESCPVSQDAIETTILLTGAIERHPFNINERCKPEACKSSKLPAKRSKFPLSAQVFIDAIKKNRSFQRLLRSKLIHMEAIIQENKQLRERVKLLKEFQINDKKISPMCYGPAENAHVAKYRMVLERSPFSLDLKKWSNVERENLAKGIKQQFQELVLQMSINQDNSEWLCGYANNFDSILASIKDLEITPENIRKFLPEFNWDQLASKYVVGRTGAECEARKSFSSSIAGIYDDTITDSLSLLGVNKSARSTWKKSLCPDRKGSFTVEEDEGLIVAVHLFGRKWNQIARFVPGRTQAQCRDRYVNSLDPSLKWGGWTKEEDSRLKTAIAKYGFCWSKVAADVPPRTDSQCRKRWRVLFPDQVPMLQAARKMKKSALISNFVDRESERPCLSLNDFLPLALLDPPSDPDAVNLPQKRKNMSSDTSEKKRPQKRIKKAQSCLKKAQAEEVEPCSGHGANKPKITEPHLEDNSVEAMHDHSPLDLVVTTTNGQGDLGEHNNIDKLIESNQMWEGFNELDDESRPCITPCENPEAGTTDGHCEEISSMNSLKRQTGRKSMLSASISDSAAVGSKVARNTTSKKERKKKGKHNKMVRSVQTTEDHLFKNKMSKPGSLSSMQILEGQDEDNITLARFVRNVSNKRFKNMDQMTQAASYASWSIKKSCRSGRAAKQTRDYLPFSLKKGHELLSEEVHNGHDHNQETLVMQDKLNKDCIDVTPGTLVVQNHSLNFKNMSISEADDNGKAMSGPVDEQTMFLDGLTEPKNINVGEDVPTDAPLASFLKKKKRKGKAMAEPVDELAIVSNGLKA 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1820 976 MobiDBLite consensus disorder prediction 152 170 - -
Lele05g1820 976 Gene3D - 430 484 - -
Lele05g1820 976 Gene3D - 485 532 - -
Lele05g1820 976 ProSiteProfiles Myb-like domain profile. 480 530 IPR001005 -
Lele05g1820 976 MobiDBLite consensus disorder prediction 748 762 - -
Lele05g1820 976 SUPERFAMILY Homeodomain-like 459 533 IPR009057 -
Lele05g1820 976 MobiDBLite consensus disorder prediction 41 72 - -
Lele05g1820 976 CDD SANT 488 530 IPR001005 -
Lele05g1820 976 ProSiteProfiles SANT domain profile. 432 477 IPR017884 -
Lele05g1820 976 ProSiteProfiles Myb-like domain profile. 433 479 IPR001005 -
Lele05g1820 976 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 480 534 IPR017930 -
Lele05g1820 976 MobiDBLite consensus disorder prediction 740 763 - -
Lele05g1820 976 MobiDBLite consensus disorder prediction 1 27 - -
Lele05g1820 976 SMART sant 484 532 IPR001005 -
Lele05g1820 976 SMART sant 433 481 IPR001005 -
Lele05g1820 976 Pfam Myb-like DNA-binding domain 437 496 - -
Lele05g1820 976 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 433 474 IPR017930 -
Lele05g1820 976 MobiDBLite consensus disorder prediction 576 611 - -
Lele05g1820 976 MobiDBLite consensus disorder prediction 137 176 - -
Lele05g1820 976 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 425 963 - -
Lele05g1820 976 SUPERFAMILY Homeodomain-like 419 475 IPR009057 -
Lele05g1820 976 Coils Coil 249 269 - -
Lele05g1820 976 CDD SANT 436 479 IPR001005 -
Lele05g1820 976 MobiDBLite consensus disorder prediction 616 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1820 Lele-ChrLele05 12232645 12240140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1820 214 611 MYB-Related Transcription Factor Family AT3G18100 36.062 1.86e-94 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele05g1820 Myb_DNA-bind_6 7.1e-14 CL0123