Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1816 ATGGTACCGAAAAGGGGAACACGTCGGCTTGAACAAATAACCGGATGCTATGATCGAACTCGAACCGGGTGGGAAAAAAAATCAGCACAGGGCAGTAGCTCCCAGAACAAAACCCCGGACACCGTCTTCTCTGCGTTGCTCGCTTTCTCGCTCTCTAGTTGCGTGCTCACTTCAACTTTTGTCTCTCTGCAGAATTCGGGTACTCTCACCATGGATATTGAGGAGGACATCCGTTCTCTACAGCTTGATTCAGCAGATTTAACAGAAGACAATAATGGTGTTGTTAATCCGGAGGATGCAAAGCCTGAAGAAGTTGAGACTTCCGCTAAGATGGAGGAAGGTAAGGAAATTCCTTCAGTGGAAGATCAAGGGGATGTGACGACAGATAGGAAAAGACACTTGAATGTTGTGTTCATTGGTCATGTTGATGCTGGTAAGTCTACAACTGGAGGCCAGATTCTTTTCCTAAGTGGCCAGGTTGATGAACGTACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGCAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAGAGGGTAAAGGGCAAAACGGTTGAAGTTGGAAGAGCGCATTTTGAGACAGAAAAAACAAGGTTTACAATTTTGGATGCACCTGGTCATAAAAGCTATGTCCCCAACATGATCAGTGGTGCGGCTCAAGCTGATATTGGAGTTTTGGTAATTTCTGCTCGAAAGGGAGAATTCGAAACTGGATATGAGAGAGGTGGACAAACCCGTGAACATGTCCAGCTTGCAAAGACATTGGGTGTGTCTAAGCTAGTTGTTGTTGTTAATAAAATGGACGAACCTACAGTAAAGTGGTCAAAAGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCTTTTCTTAAGTCATCGGGCTACAATGTGAAGAAAGATGTACTGTTTTTACCAATGTCTGGGCTGACTGGTGGCAACATCAAAACAAGAGTGGATAAAAGCACTTGTCCTTGGTGGGATGGTCCCTGCCTATTTGAAGTCCTTGATGGTGTTGAAATTCCACCTCGTGACCCCAAAGGCCCTTTCAGGATGCCCATAATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGAAAAGTAGAATCTGGTACTGTCCATGGAGGGGATTCCTTGTTGGTTATGCCAAATAAGGATCATGTAAAAGTTGTCGCTGTGTTGATTGATGAAGATAGGGTCAAACGTGCTGGACCTGGTGAGAATTTACGGGTTAGAATATCTGGTGTTGAAGAAGAAGACATATTAGGCGGGTTTGTTCTGTCTAGTGTTGAAAATCCAATACCAGCTGTTACTGAGTTTGTGGCTCAGCTGCAGATCCTTGAATTGCTGGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTTTGCATATCCACAGTGTTGTTGAAGAATGTGAGATTGTTGAGCTCGTACAGCAAATTGATCCAAAGACAAAGAAACCTATGAAAAAGAAGCCTCTCTTTGTGAAGAATAATGCTGTTGTTGTCTGCCGAGTTCAGGTTAATAATTCTATATGCATTGAGAAATTCTCTGATTTCCCCCAACTTGGGAGGTTCACTCTTCGCACTGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTTAA 1674 0.4265 MVPKRGTRRLEQITGCYDRTRTGWEKKSAQGSSSQNKTPDTVFSALLAFSLSSCVLTSTFVSLQNSGTLTMDIEEDIRSLQLDSADLTEDNNGVVNPEDAKPEEVETSAKMEEGKEIPSVEDQGDVTTDRKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKTRFTILDAPGHKSYVPNMISGAAQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLVVVVNKMDEPTVKWSKERYDEIESKMIPFLKSSGYNVKKDVLFLPMSGLTGGNIKTRVDKSTCPWWDGPCLFEVLDGVEIPPRDPKGPFRMPIIDKFKDMGTVVMGKVESGTVHGGDSLLVMPNKDHVKVVAVLIDEDRVKRAGPGENLRVRISGVEEEDILGGFVLSSVENPIPAVTEFVAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVELVQQIDPKTKKPMKKKPLFVKNNAVVVCRVQVNNSICIEKFSDFPQLGRFTLRTEGKTVAVGKVTGF 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1816 557 SUPERFAMILY Translation proteins 354 447 IPR009000 -
Lele05g1816 557 PANTHER TRANSLATION FACTOR 123 555 - -
Lele05g1816 557 Gene3D Translation factors 360 445 - -
Lele05g1816 557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 366 IPR027417 -
Lele05g1816 557 CDD eRF3_II 362 443 - -
Lele05g1816 557 Pfam Elongation factor Tu GTP binding domain 131 331 IPR000795 GO:0003924|GO:0005525
Lele05g1816 557 CDD EF1_alpha 135 356 - -
Lele05g1816 557 FunFam Putative translation elongation/initiation factor family protein 449 557 - -
Lele05g1816 557 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 187 202 IPR031157 -
Lele05g1816 557 Gene3D Translation factors 450 557 - -
Lele05g1816 557 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 451 556 IPR009001 -
Lele05g1816 557 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 359 445 - -
Lele05g1816 557 MobiDBLite consensus disorder prediction 88 126 - -
Lele05g1816 557 CDD eRF3_C_III 449 555 - -
Lele05g1816 557 PRINTS GTP-binding elongation factor signature 214 224 IPR000795 GO:0003924|GO:0005525
Lele05g1816 557 PRINTS GTP-binding elongation factor signature 135 148 IPR000795 GO:0003924|GO:0005525
Lele05g1816 557 PRINTS GTP-binding elongation factor signature 274 283 IPR000795 GO:0003924|GO:0005525
Lele05g1816 557 PRINTS GTP-binding elongation factor signature 230 241 IPR000795 GO:0003924|GO:0005525
Lele05g1816 557 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 131 360 IPR000795 GO:0003924|GO:0005525
Lele05g1816 557 Pfam Elongation factor Tu C-terminal domain 448 555 IPR004160 -
Lele05g1816 557 Gene3D - 115 354 IPR027417 -
Lele05g1816 557 MobiDBLite consensus disorder prediction 96 126 - -
Lele05g1816 557 PRINTS Yeast eukaryotic release factor signature 237 244 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele05g1816 557 PRINTS Yeast eukaryotic release factor signature 499 508 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele05g1816 557 PRINTS Yeast eukaryotic release factor signature 358 369 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele05g1816 557 PRINTS Yeast eukaryotic release factor signature 272 279 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Lele05g1816 557 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 110 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1816 Lele-ChrLele05 12189358 12201017 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1816 131 552 Eukaryotic Initiation Factors Gene Family AT5G60390 37.412 3.58e-94 293