Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1805 ATGAGCGGAAGCTCGCAGGCTCAGTCTGCCAGTGGAAATGGGAGCGTAAATTTGGAGCCTCAGGACCCAAAATCAAACCCTAATAACAAGCGGGAGGCTTATTCAGAAACTGATGATCTGACAGTAAAGAAATCCAGAACTGAAGCTTCGACTGTGCCAGATACTTCTGGCAGTGAAGAAGAAGGGAACTCAGGAGCTGTTTCAGGGCAAAAGAATGCCAAGGAACTGAAAGAAGGGAACTCAGGAGCTGTTTCAGGGCAACAGAATGCCAAGGAACTAACTTTCGAGATTGAGGCGGTCGCAGCTGAGGATAAGGGGTCTAGGCATACAATGGAAGATGCCTGGGTAGTGCTTTTGGACGCCAGTTTAGATCACCCCGGAAACCTGAGATGTTCACACTTTGCAATCTATGATGGACATGGAGGCCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATGAAAATGTTCTTTCAACAGGATTACCACGTGAGTTGTTAGATGTAAAGGTAGCTAAAAGAGCAATACTTGAAGGTTTTCGCAAAACCGATGAGTCCCTTCTTCAAGAAAGTGCTGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGGTATTGGGACAGAAAGTTTTTGTTGCAAATATAGGAGATGCCAAAGCAGTTTTAGCTCGATCAGCTATAACTGATGGATCCCAAAATCAATCAGATGGAGTCCATGCATTGAAGGCCATTGTTTTGACAAGGGAACACAAGGCAATCTACCCACAGGAGCGGGCTCGTATTCAGAAGGTTGGTGGTGTTGTGAGCTCCAATGGACGATTGCAAGGGCGTCTAGAAGTTTCTAGGGCATTTGGTGATCGCCAGTTTAAGAAGGTGGGTGTTACTGCAACCCCAGATATCCATTCTTTCGACCTTACTGATAGAGAGCATTTTATCATTCTTGGCTGTGATGGCCTATGGGGGGTATTTGGTCCCAGTGATGCAGTTGATTTTGTTCAGAAACTATTGAGTGAGGGGTTGCCTGTAACAACCGTGGCCCGCCATCTCGTAAGAGAAGCTGTTCGTGAGCGGCGCTGTAAGGATAATTGCACTGTAATTGTTATTGTATTCAAGCGTAAGTAG 1128 0.4628 MSGSSQAQSASGNGSVNLEPQDPKSNPNNKREAYSETDDLTVKKSRTEASTVPDTSGSEEEGNSGAVSGQKNAKELKEGNSGAVSGQQNAKELTFEIEAVAAEDKGSRHTMEDAWVVLLDASLDHPGNLRCSHFAIYDGHGGRLAAEYAQKHLHENVLSTGLPRELLDVKVAKRAILEGFRKTDESLLQESAAGGWQDGATAVCVWVLGQKVFVANIGDAKAVLARSAITDGSQNQSDGVHALKAIVLTREHKAIYPQERARIQKVGGVVSSNGRLQGRLEVSRAFGDRQFKKVGVTATPDIHSFDLTDREHFIILGCDGLWGVFGPSDAVDFVQKLLSEGLPVTTVARHLVREAVRERRCKDNCTVIVIVFKRK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1805 375 MobiDBLite consensus disorder prediction 1 24 - -
Lele05g1805 375 SMART PP2C_4 94 370 IPR001932 -
Lele05g1805 375 Pfam Protein phosphatase 2C 103 360 IPR001932 -
Lele05g1805 375 MobiDBLite consensus disorder prediction 1 87 - -
Lele05g1805 375 MobiDBLite consensus disorder prediction 46 70 - -
Lele05g1805 375 CDD PP2Cc 102 372 IPR001932 -
Lele05g1805 375 ProSiteProfiles PPM-type phosphatase domain profile. 98 372 IPR001932 -
Lele05g1805 375 SUPERFAMILY PP2C-like 97 373 IPR036457 -
Lele05g1805 375 MobiDBLite consensus disorder prediction 25 45 - -
Lele05g1805 375 Gene3D - 78 375 IPR036457 -
Lele05g1805 375 PANTHER PROTEIN PHOSPHATASE 2C 70 370 IPR015655 GO:0004722|GO:0006470
Lele05g1805 375 FunFam Probable protein phosphatase 2C 67 86 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1805 Lele-ChrLele05 12132359 12137171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1805 27 324 PP2C-type Phosphatase Gene Family AT1G18030 67.559 5.58e-139 396