Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1787 ATGGCCGCCAAAAGGTTCTACGACGATTCTGATCCGGACCCAGAAGACAACCGAAGTGATAAACGCATGAGACCCAATCGACCTTCTTTTGCTTCGATCATAGGAGAAGTGGTTATGGTGAAGAACATGCAGAACCTTTTCTCTGCCTTGGAGCCTTTGCTCAGAAGAGTCGTTACTGAAGAGGTTGAACGAGTGATGAGGCATTGTGGTCCTCGTTCGATGACTCGGTCTCCTTCTCTGCGAATCCAAGCATGTGAACAGACACAAGCTTCAGGCTATCAATTAATGTTTAGCAAGGAGCTTTCTCTTCCAATATTCACAGGAACCAGGATTTTGGACAGTGATGGAAACCCTATTCAAGTGATGCTTGGTGAGAAGAACGGTGACCAAATGGTTCGAACAAGTCTCCCCCAAGCCATCAAGCTGGAACTGGTGGTTCTGGACGGAGACTTCCCGGCCAGTGACAAGGAGGCGTGGACCACCGAGGAGTTCGATAGGCACATATTGAAGGAGAGAGCCGGGAAACGACCTTTGCTCACTGGAGACGTGAACCTCACCATGAGGGATGGGATTGCACCCACGGGTGAAATTGAGTTCACTGACAATTCTAGCTGGATTCGTAGCCGGAAGTTCCGGGTCGCCGTCAGGGTTGCTCCGGGCAGTAACCTCAGTGTTCGGATTCGAGAAGGCATGACGCAGCCCTTCGTTGTGAAAGATCATCGTGGGGAATTGTACAAGAAACATCACCCACCAATGTTGCACGATGAAGTGTGGCGTCTGGAGAAGATCGGCAAAGACGGAGCTTTCCACAAGAAGCTGTCGAAGGAAGGTATTCACACTGTTCAGGACTTCCTCAAGCTGTTTTTTGTCGATCGTCAGAAACTCAGAAAGATTCTTGGGATGGGGATGTCCGAGAAAATGTGGGAACTGACGGTGAAGCACGCGCGTACCTGTGAGATGGGGACCAAACTCTACGTGTACCGAGGGTCCCACTTCGCCCTCTATCTGAATCCAATCTGCCAGCTCATTAAGGCCGAAATGAACGGCAACACCTTCTGGGGCCAGGATATTACCAGTAACATTAATTGGAGCTACATAGAGAAATTGGTGAAGGAAGCATATTTGAGGTGGAATTGCTTGGAAGTAATGGATGGATATCTGGGGAGGAACATTTCTCTACTAACCCAAGGGGACAACATGGGGCAAATGCCAAACAACAACATCGACAACGATGAAGGAATAGCATTGGAAGGGGTGGATTTCTTCGGAGAAAGCTATGGAACAAATAATGTTGCAATTGGAGGACCCAGGGAGTGGGCGCTGAATAACAGCGCATTCTCGGCAACATCGTACGCGAATGCAATGTCTTATAACTTCTCTGAGACACAATCAGATGGCAACATAACTCCCTCCGCTTCTCTCACGGACGAAGAAATTTCGACGCTTTTGCCTCCTTTTCCAGATCCTTACAATTTTGACTCTCACAAAGTCGCTTCTGCCTCCGCCAAGGAACTCAATTTGGCTGCAACTTCAATAGCATTAAATATCATAACCATTTCACAAGATTCAAATGCTAAACTCAGAATCATCCTGATATCATTCCAACAGCAAAAGAAACATTCCCTGATGCTGAAGCTTGCATGCTTTTTCCTTCCTCTGTTTTCCTTCTTCATCCATATTGCCTCTCCTAGCAATTCCACTTCATCTTCCACAATCTGTCCCAACTACAGCTGTGACGATGGGCTCCAAATCAGATACCCTTTCTGGCTCTTACGTAGTTCCCCTCCTGACCAGTACTGTGGTTACCGAGAACTCGGCCTCATCTGCGCTGATAGCTACACCATCCTCTCAATACACGGGTTATATTATTATGTCACAAACATAGACTATGATAATCATACTCTTCACCTTGTTGATTATGATACTTTCAACCAAACATGTCCAAGGGCACTTCACAGTGTTCCATTGGGCAACTTGCCCCTTTCTCACTCTCCTTTGAATTTGAACCTTAGCTTTAATTACAATTGCAGTTCTCACCCTTCTGATGTGCCGCCCATAAGGTGTTTGACATCTGGTGTGAATGAGTCCTTTGTCTTTATGATGGGGAACGAGAGTACTTCTGGGGGTTTTGATTGGTCCAAGACTTGTGAAGAGAGTATTGTGGTGACAGTCATGAAGGATCGGATTACAAGGGAAGGGTTGATGAATGAGTACAAAGAGGCCATGAATGAAGGGTTTGTTCTTGATTGGCAAACTGCTGAGAGTTGTGAGGAGTGTGAAGCTTCTGATGGGATTTGTGGTTACAATAATACCAGAAAGGAGTCCTTGTGCTTCTGCAAGGATGGCAGCGTACAAAGCAATAGCTGCTCAGTTAGTAATGGTCTTGTGAGGCTTGCAAGTCACGGAAAGCAGAACATAGTGGCCATTTGGGAGTGA 2436 0.4672 MAAKRFYDDSDPDPEDNRSDKRMRPNRPSFASIIGEVVMVKNMQNLFSALEPLLRRVVTEEVERVMRHCGPRSMTRSPSLRIQACEQTQASGYQLMFSKELSLPIFTGTRILDSDGNPIQVMLGEKNGDQMVRTSLPQAIKLELVVLDGDFPASDKEAWTTEEFDRHILKERAGKRPLLTGDVNLTMRDGIAPTGEIEFTDNSSWIRSRKFRVAVRVAPGSNLSVRIREGMTQPFVVKDHRGELYKKHHPPMLHDEVWRLEKIGKDGAFHKKLSKEGIHTVQDFLKLFFVDRQKLRKILGMGMSEKMWELTVKHARTCEMGTKLYVYRGSHFALYLNPICQLIKAEMNGNTFWGQDITSNINWSYIEKLVKEAYLRWNCLEVMDGYLGRNISLLTQGDNMGQMPNNNIDNDEGIALEGVDFFGESYGTNNVAIGGPREWALNNSAFSATSYANAMSYNFSETQSDGNITPSASLTDEEISTLLPPFPDPYNFDSHKVASASAKELNLAATSIALNIITISQDSNAKLRIILISFQQQKKHSLMLKLACFFLPLFSFFIHIASPSNSTSSSTICPNYSCDDGLQIRYPFWLLRSSPPDQYCGYRELGLICADSYTILSIHGLYYYVTNIDYDNHTLHLVDYDTFNQTCPRALHSVPLGNLPLSHSPLNLNLSFNYNCSSHPSDVPPIRCLTSGVNESFVFMMGNESTSGGFDWSKTCEESIVVTVMKDRITREGLMNEYKEAMNEGFVLDWQTAESCEECEASDGICGYNNTRKESLCFCKDGSVQSNSCSVSNGLVRLASHGKQNIVAIWE 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1787 811 Pfam Wall-associated receptor kinase galacturonan-binding 573 639 IPR025287 GO:0030247
Lele05g1787 811 PANTHER OS02G0177800 PROTEIN 3 474 IPR012416 GO:0005516
Lele05g1787 811 Pfam Calmodulin binding protein C-terminal domain 323 381 IPR046829 -
Lele05g1787 811 Pfam Wall-associated receptor kinase C-terminal 691 782 IPR032872 -
Lele05g1787 811 MobiDBLite consensus disorder prediction 1 27 - -
Lele05g1787 811 MobiDBLite consensus disorder prediction 1 25 - -
Lele05g1787 811 Pfam Calmodulin binding protein-like N-terminal domain 93 240 IPR046831 -
Lele05g1787 811 Pfam Calmodulin binding protein central domain 252 318 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1787 Lele-ChrLele05 11880917 11887444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1787 3 385 Calmodulin-binding Proteins AT5G57580 47.668 6.15e-114 358