Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1780 ATGAGAAGAGTCAACATTTGCAAGGCCTGTATAATTGGAAATTCAGGGGGAAACGATTTAGAATTCATCCTTTTCCTCAGTTCTCATCTCAGTGCACATATAAAAAGCATGAAGCAAGAAAGTAAAACAATTCCCAAGGAAGAAAAGAAAGCGTCCATTCCATCGTTATATAAACAAGTACAATCCCAAACCCTAGGTTTTTCACTGAACTCGGCGAAGCCTGACCAGAGAGTCTCCCCCGAGGCAGCGGATCTAGCCGGTGGTTTGCTCTTTCTGAGAGTAGTGAAGATGTACACATCAAGGAAGAAAATCCACAAGGACAATAATGCTGAGCCAACTGAGTTCGAAGAGTCAGTTGGGCAGGCATTTTTTGATTTGGAAAATACGAATCAGGAGCTGAAAAGTGATTTGAAAGATCTATACATAAATTCAGCAGTTCAGATTGATGTAGCTGGGAACCGCAAGGCTGTGGTTATTCATGTTCCTTATAGATTAAGGAAGGCTTTTAGGAAGATTCATGTTAGGCTTGTCAGAGAGCTTGAGAAGAAGTTCAGTGGGAAGGATGTAGTGTTGATTGCCACCCGGAGGATATTGAGGCCTCCAAAGAAGGGTTCTGCTGCACAACGTCCTAGAAGCCGCACACTCACTGCTGTGCATGAAGCAATGCTGGAGGATGTTGTATTGCCTGCTGAGATTGTTGGGAAGCGCGTTAGGTATAGAGTTGATGGGTCCAAGATTATGAAGGTTTTCTTGGACCCCAAGGAGCGAAACAACACTGAGTACAAGCTTGAGACTTTTACTGCGGTATACAGGAAGCTTTCGGGCAAAGATGTTGTATTTGAGTATCCTATCACGGAGGCTTAG 864 0.4375 MRRVNICKACIIGNSGGNDLEFILFLSSHLSAHIKSMKQESKTIPKEEKKASIPSLYKQVQSQTLGFSLNSAKPDQRVSPEAADLAGGLLFLRVVKMYTSRKKIHKDNNAEPTEFEESVGQAFFDLENTNQELKSDLKDLYINSAVQIDVAGNRKAVVIHVPYRLRKAFRKIHVRLVRELEKKFSGKDVVLIATRRILRPPKKGSAAQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYRVDGSKIMKVFLDPKERNNTEYKLETFTAVYRKLSGKDVVFEYPITEA 287
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1780 287 Pfam Ribosomal protein S7e 103 282 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele05g1780 287 PANTHER 40S RIBOSOMAL PROTEIN S7 97 286 IPR000554 GO:0003735|GO:0005840|GO:0006412
Lele05g1780 287 ProSitePatterns Ribosomal protein S7e signature. 175 188 IPR000554 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele05g1780 Lele-ChrLele05 11810750 11815403 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1780 97 287 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 78.534 1.81e-114 326